Gene Information

Name : Desdi_1131 (Desdi_1131)
Accession : YP_007220042.1
Strain : Desulfitobacterium dichloroeliminans LMG P-21439
Genome accession: NC_019903
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1171818 - 1172501 bp
Length : 684 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAGAATTTTGGTAGTCGACGATGATGAACGAATACGAGAGATTGTTCGCCTATACCTTGAGGCAGAGGGCTACGAAAT
TGAAGAAGCTGAAAACGGAAATAGCGCTTTAGAAAGGGTTCGAAATGGTGCATTTGACCTTATTGTCTTGGATTTAATGA
TTCCTGGTTTAGATGGGTGGACCGTGTGCAAGATCTTAAGAAAAGAGACTCAAATTCCGATTATCATGTTGACTGCTAAA
GGTGAAGAAAATGATCGGATTCTCGGCTTTGATTTAGGTGCCGATGACTATGTAGTAAAACCATTTAGTCCAAGGGAACT
GAATGCACGTGTAAAAGCTGTTCTTCGAAGGCTAGATGGAGAACAATCTAAAGATCATCTCATCATCTTCCCTGGTTTTA
CAATTAACCAAATTACCCGTGAAATCGTAGTAGAAGGCAAAGAAGTTAAACTTACAGCGAAAGAATTTGACCTATTATTA
GTTTTAGCCAAATATCCAAGTCGAATTTTTACACGAGACCAGTTGCTTAACTCAGTCTGGGATTTTGATTACTGCGGAGA
TTCAAGAACGGTCGATACTCATATTAACAGATTACGTTCCAAATTTGATAGTCAAGTAGGTTACAGTGATTTCATTCAAA
CTGTTAGGGGAGTTGGTTACAAATTCGAATTCAATGGTCATTGA

Protein sequence :
MRILVVDDDERIREIVRLYLEAEGYEIEEAENGNSALERVRNGAFDLIVLDLMIPGLDGWTVCKILRKETQIPIIMLTAK
GEENDRILGFDLGADDYVVKPFSPRELNARVKAVLRRLDGEQSKDHLIIFPGFTINQITREIVVEGKEVKLTAKEFDLLL
VLAKYPSRIFTRDQLLNSVWDFDYCGDSRTVDTHINRLRSKFDSQVGYSDFIQTVRGVGYKFEFNGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-35 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 4e-39 47
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 3e-39 47
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-38 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 5e-39 46
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 3e-40 45
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 3e-40 44
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-37 44
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 8e-33 43
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 1e-32 43
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 8e-33 43
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 7e-33 43
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 1e-32 43
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 3e-37 42
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 1e-31 42
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 1e-31 42
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 5e-34 41
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 3e-32 41
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 2e-32 41
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 2e-31 41
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_008702.1.4607594. Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 5e-35 42
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-28 42
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-34 41
Desdi_1131 YP_007220042.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 1e-34 41