Gene Information

Name : phoB [H] (TVNIR_0891)
Accession : YP_007216062.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : Phosphate regulon transcriptional regulatory protein PhoB (SphR)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 806863 - 807552 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACTCGACATCCTCCTGGTGGAGGACGACGCGGCGGTCAGGGAGGTACTCGCCGTCCCGCTGCAGAAGGCAGGATT
CAACGTGATCGAGGCGGCCGACGTGCGCGAGGCGCGCGCGGCACTGCTGCAGCAGTTGCCGGATCTGATCCTGCTCGACT
GGATGCTGCCCGATGTCAGCGGGGTCGAGTGGGCAAGGTCGCTCAAGAGTGCTCCGCACACCCGGAACATCCCGATCATC
ATGCTCACCGCGCGCGGAGAGGAAGAGGATCGTGTCAAGGGTCTCGAAGTCGGTGCCGACGATTACGTGACCAAGCCGTT
CTCCCCGCGGGAGCTGATCGCGCGCATACGGGCGGTACTCCGCCGAACCACCCCGACCAGCAGCGACGAGCCGGTGGAGG
TCGACGGGCTGCGACTGGATCCCGTGAGCCACCGCGTGACCGCCCATGGCGCGAACGTGGAAGTCGGCCCGACCGAGTAC
CGCCTGCTGCATTTTTTCATGACGCACCAGGATCGAGTGTTCACGCGCGGGCAATTGCTCGATAACGTATGGGGTACCAA
CGTCTACGTCGAGGAGCGCACGGTCGATGTACATATCCGTCGCCTGCGGATTGCATTGTCGGGTTCCGGTCATGATGCCC
TGGTACAAACGATCCGCGGTGCCGGATATCGCTTTTCCAGGCAGCCCTGA

Protein sequence : 
MALDILLVEDDAAVREVLAVPLQKAGFNVIEAADVREARAALLQQLPDLILLDWMLPDVSGVEWARSLKSAPHTRNIPII
MLTARGEEEDRVKGLEVGADDYVTKPFSPRELIARIRAVLRRTTPTSSDEPVEVDGLRLDPVSHRVTAHGANVEVGPTEY
RLLHFFMTHQDRVFTRGQLLDNVWGTNVYVEERTVDVHIRRLRIALSGSGHDALVQTIRGAGYRFSRQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-32 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB [H] YP_007216062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) HE999704.1.gene2815. Protein 4e-37 43
phoB [H] YP_007216062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) NC_008702.1.4607594. Protein 5e-36 43
phoB [H] YP_007216062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) CP001918.1.gene5135. Protein 2e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB [H] YP_007216062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1563 Protein 3e-32 42
phoB [H] YP_007216062.1 Phosphate regulon transcriptional regulatory protein PhoB (SphR) VFG1702 Protein 2e-32 42