Gene Information

Name : TVNIR_3840 (TVNIR_3840)
Accession : YP_007218945.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : General secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3980775 - 3981236 bp
Length : 462 bp
Strand : -
Note : -

DNA sequence : 
ATGCCCCGAAACCCGACGCTTTCCACGCCCCGCGCCCGCAGTGGCGGCTTCACGCTGATCGAAATCATGGTGGTGGTCGT
GATCCTCGGGATCCTGGCCGCGATCGTGGTGCCGCGAGTGATGGATCGTCCCGACGACGCGCGCATCACCAAGGTCAAGA
GCGACATCCGGGCGATGGAGTCGGCCCTGAACCTGTACCGGCTGGACAACTTCGCGTACCCGACCACCACGCAGGGGCTC
CAGGCGCTGGTCGAGCGGCCAAGCTCGGGCCCGGAACCGCGCAATTACCGCTCGGGCGGCTATATGGACCGGCTGCCCAA
GGATCCCTGGGGCAACGACTACCAGTACCTGAATCCCGGCACCCGGGGCGAGTTCGACGTCTTCAGTTTCGGTGCCGACG
GCCGCCGCGGCGGCAGCGGGATCAACGCCGAGATCGGTAACTGGAACCTCGACGAGTTCTGA

Protein sequence : 
MPRNPTLSTPRARSGGFTLIEIMVVVVILGILAAIVVPRVMDRPDDARITKVKSDIRAMESALNLYRLDNFAYPTTTQGL
QALVERPSSGPEPRNYRSGGYMDRLPKDPWGNDYQYLNPGTRGEFDVFSFGADGRRGGSGINAEIGNWNLDEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-32 58
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-32 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_3840 YP_007218945.1 General secretion pathway protein G VFG1871 Protein 1e-30 63
TVNIR_3840 YP_007218945.1 General secretion pathway protein G VFG0180 Protein 5e-34 63
TVNIR_3840 YP_007218945.1 General secretion pathway protein G VFG2050 Protein 2e-32 58