Gene Information

Name : thiC [H] (TVNIR_3762)
Accession : YP_007218871.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Unknown
Product : Thiamin biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3898061 - 3899950 bp
Length : 1890 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCCATCCCCGAAGATTTCATCCGCCGCACCGCGCAGGTTTCCAACGCCGTGACCCGGCCCTTCCCGAATTCCCG
CAAGGTGTTCGTGCAGGGCACGCGCCCCGATCTTCGTGTGCCGATGCGCGAGGTCATCCAGCAACCGACGCACACCTCGA
CCGCAACCGAGGATAACCCGGCGATCACGATCTACGACACCTCCGGTCCGTACACGGACCCGTCGGCCGAAATCGACCTG
CTGCGCGGTCTCCCGGCGGTGCGGACGGCCTGGATCAAGGAACGCGGCGACACATCGGTGCTCGACGGCCCGACCTCCGA
CTACGGCCGCAGCCGTGCCGCCGACCCGGCGTTGGCAGCCCTGCGGTTCGCGCACATCCGCGTGCCGCGGCGCGCGCTAT
CGGGCCGCAACGTGACCCAGATGCACTATGCCCGGCGCGGGATCGTGACCCCGGAGATGGAGTTCGTCGCGATCCGCGAG
AACTGCCGTCTCGCCGAGATGCGTGCCGACCCGCGCTACACCCGCCTGCTGCGAAGCCATGCCGGCGAGGCCTTCGGCGC
GCGTATCCCCGACGAGATCACGCCCGAGTTCGTACGCGCCGAGGTCGCCGCCGGACGCGCAATCATCCCCGCGAACATCA
ACCACCCGGAACTGGAACCGATGATCATCGGCCGCAACTTCCGGGTGAAGGTCAACACCAACATCGGCAACTCGGCCGTG
ACCTCGAGCATCGAGGAGGAAGTCGAGAAGCTCGTCTGGTCCGCGCGCTGGGGCGGCGATACGTTAATGGACCTGTCGAC
CGGCAGGAACATCCACGAGACGCGCGAATGGATCCTGCGCAACTCGCCGGTGCCGATCGGCACGGTGCCAATCTACCAAA
CATTGGAGAAGGTCGACGGCAAGGCCGAGGAACTGACCTGGGAACTCTTCCGGGACACGCTGATCGAGCAGGCGGAGCAG
GGCGTGGACTACTTCACGATCCACGCTGGCGTGCGCCTGCCCTACGTGCCGCTGACGGCCGACCGGGTCACCGGCATCGT
CTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTTGCCCATCACCGCGAGAACTTCCTGTACACGCGTTTCGCCGAGA
TCTGCGAGATCATGAAGGCCTACGACGTGTCGTTCTCGCTCGGCGACGGCCTGCGCCCGGGCTGCATCGCGGATGCGAAC
GACCGCGCGCAGTTCGCTGAACTCGAAACGCTCGGCGAACTGACCAGGATCGCCTGGGAGCACGACGTTCAGGTGATGAT
CGAGGGCCCGGGCCACGTGCCACTGCACAAGGTCAAGGAGAACGTCGACAAGGAACTCGCCGACTGCTACGAGGCGCCGT
TTTACACCCTCGGGCCGCTGGTCACCGACATCGCGCCCGCCTACGACCACATTACCTCGGGCATCGGCGCCGCGAATATC
GGCTGGTACGGCACCGCGATGCTCTGCTACGTGACGCCAAAGGAGCATCTCGGGCTGCCGAACCGCGAGGACGTGCGCGA
CGGCATCATCACCTACCGGATCGCCGCGCATGCGGCCGACCTCGCCAAGGGTTTCCCCGGCGCGCAGCTGCGCGACAACG
CATTGTCGAAGGCGCGTTTCGAGTTCCGCTGGGAGGACCAGTTCAACTTGAGCCTGGATCCCGAGCGCGCGCGCGAGTAC
CACGACCAGACGCTGCCGAAGGAAGCGCACAAGGTCGCCCACTTCTGCTCGATGTGCGGCCCGAACTTCTGTTCGATGAA
GATCACGCAGGACGTGCGCGATTACGCGGCGCGGCAGGGTCTGGACGAACACGAAGCGCTCGAGCGCGGCATGCAGGAAA
AGGCCTCCGAATTCGTCGCGAAAGGCGGCGCACTCTACCGCGAGATCTGA

Protein sequence :
MSAIPEDFIRRTAQVSNAVTRPFPNSRKVFVQGTRPDLRVPMREVIQQPTHTSTATEDNPAITIYDTSGPYTDPSAEIDL
LRGLPAVRTAWIKERGDTSVLDGPTSDYGRSRAADPALAALRFAHIRVPRRALSGRNVTQMHYARRGIVTPEMEFVAIRE
NCRLAEMRADPRYTRLLRSHAGEAFGARIPDEITPEFVRAEVAAGRAIIPANINHPELEPMIIGRNFRVKVNTNIGNSAV
TSSIEEEVEKLVWSARWGGDTLMDLSTGRNIHETREWILRNSPVPIGTVPIYQTLEKVDGKAEELTWELFRDTLIEQAEQ
GVDYFTIHAGVRLPYVPLTADRVTGIVSRGGSIMAKWCLAHHRENFLYTRFAEICEIMKAYDVSFSLGDGLRPGCIADAN
DRAQFAELETLGELTRIAWEHDVQVMIEGPGHVPLHKVKENVDKELADCYEAPFYTLGPLVTDIAPAYDHITSGIGAANI
GWYGTAMLCYVTPKEHLGLPNREDVRDGIITYRIAAHAADLAKGFPGAQLRDNALSKARFEFRWEDQFNLSLDPERAREY
HDQTLPKEAHKVAHFCSMCGPNFCSMKITQDVRDYAARQGLDEHEALERGMQEKASEFVAKGGALYREI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 76
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71