Gene Information

Name : glnA [H] (TVNIR_3638)
Accession : YP_007218749.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : Glutamine synthetase type I
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 3779054 - 3780463 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGTCCGCAGCCGATGTGCTGAAAACCATCCAGGACAAGGAAGTGAAGTTCATCGACTTCCGCTTTACCGACAGCAAGGG
CAAGGAGCAGCATGTGACTGTCCCGGCCCACGAGATCGAAGAGGATACCTTCGAGGATGGCAAGATGTTCGACGGATCCT
CGATTGCCGGCTGGAAGGGCATCAACGAGTCCGACATGATCCTGATGCCCGATCCGGAGTCGGCGGTGCTGGATCCGTTC
TTCGAGGATCTGACGCTGAACCTGCGCTGCGACGTGGTCGAGCCGGCGACCATGCAGGGCTACGATCGCTGCCCGCGCTC
CCTGGGCAAGCGTGCCGAGGCCTACCTGGCCTCGACCGGTATTGCCGACACGGCGCTGTTCGGGCCGGAGAACGAGTTCT
TCGTGTTCGACGACGTGAAATGGGGTGCCTCCCTCTCGGGTTCCTACTGCAGGGTCGATTCGAGCGAGGCTTCCTGGAAC
TCCGAGCGCGTCTACGAGGACGGCAACATCGGCCACCGGCCAACGGTCAAGGGCGGCTATTTCCCGGTGCCGCCGGTCGA
CAGCCTGCACGACATCCGTTCGACGATGTGCGACGTGCTCGACGAGATGGGGCTGCACACCGAGGTGCACCACCACGAGG
TCGCGACCGCGGGGCAGTGCGAGATCGGTGTCGGTGCCGCGATGCTGACGCGCAAGGCCGACGAGGTCCAGATCCTGAAG
TATGTCGTCCAGAACGTGGCCCACGCCCACGGCAAGACGGCGACCTTCATGCCCAAGCCGATCGTCGGTGACAACGGGTC
CGGGATGCATGTGCACATGTCCCTGTCGAAGGACGGCGTGAATCTCTTCAGCGGCGACCTCTATGGCGGACTGTCGGAGA
CGGCCCTCTACTATATCGGCGGGATCATCAAGCACGCGCGGGCGCTGAACGCGTTCACGAACCCCTCGACCAACAGCTAC
AAGCGGCTGGTGCCCGGCTTCGAGGCGCCGGTGATGCTTGCCTACTCGGCGCGCAACCGTTCCGCGTCGATTCGCATCCC
GTTCGTGATGAGCCCGAAGGCACGGCGCATCGAGGTCCGGTTCCCGGATTCCACCGCCAACCCGTACCTGGCCTTCGCCG
CCATGCTGATGGCCGGCATCGACGGGATCCAGAACAAGATCCATCCCGGGGACGCGATGGACAAGAACCTGTACGACCTG
CCGCCGGAGGAAGAGAAGAACATCCCGCAGGTCAGCAATGCGCTGGACAACGCGCTCGACGAACTCGATAAGGATCGCGC
GTTCCTGACCGCGGGCGGCGTGTTCACCGACGACATGATCGATGCCTACATCGAGCTGAAGATGGAAGAAGTCACGCGCC
TGCGCATGACGACCCACCCGGTCGAGTTCGATATGTATTACAGCCTGTAG

Protein sequence :
MSAADVLKTIQDKEVKFIDFRFTDSKGKEQHVTVPAHEIEEDTFEDGKMFDGSSIAGWKGINESDMILMPDPESAVLDPF
FEDLTLNLRCDVVEPATMQGYDRCPRSLGKRAEAYLASTGIADTALFGPENEFFVFDDVKWGASLSGSYCRVDSSEASWN
SERVYEDGNIGHRPTVKGGYFPVPPVDSLHDIRSTMCDVLDEMGLHTEVHHHEVATAGQCEIGVGAAMLTRKADEVQILK
YVVQNVAHAHGKTATFMPKPIVGDNGSGMHVHMSLSKDGVNLFSGDLYGGLSETALYYIGGIIKHARALNAFTNPSTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPFVMSPKARRIEVRFPDSTANPYLAFAAMLMAGIDGIQNKIHPGDAMDKNLYDL
PPEEEKNIPQVSNALDNALDELDKDRAFLTAGGVFTDDMIDAYIELKMEEVTRLRMTTHPVEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-109 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA [H] YP_007218749.1 Glutamine synthetase type I VFG1399 Protein 3e-107 50