Gene Information

Name : TVNIR_3505 (TVNIR_3505)
Accession : YP_007218620.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Unknown
Product : type III restriction enzyme, res subunit - like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3629686 - 3632085 bp
Length : 2400 bp
Strand : -
Note : -

DNA sequence :
GTGGGCGGGGATAACCAAATCTTCTGGCTGAGTGTGGATTCGATGGCGGATCACGGTGAATTGGCCGCATTGCAGGTCGA
GAACGCCCGACTGATTGCGTTGCTGGAAGCCCACGGCATTGAATGGCGTTTGCCGTGGGCACCCATTACAGCGGTTCGAG
AGCCAGAATCGTCCAAATTTTCCACCGCTGAAAAAGTCGCACTGTTCCGGCGCCTATTCCGTGGGCGCACGGACGTCTAC
CCCATCCGTTGGGAGAGCAAGACCAGCGACAAGGCCGGGTACGCGCCCGCCTGCGCGAATGAGTGGCGAGCTGGGGTCTG
CGAAAAGCCACGCATCAAGTGCGGAAACTGCAGCAATCGTTTGTTGATCCCACTTTCCGATGCCGTAATCTACGACCATC
TGGCCGGTGAGCACACGGTCGGCGTCTATCCACTGCTGGAAGACGACACCTGCTACTTCTTGGCGGCCGATTTTGACGAA
GCCGATTGGCGCGATGATGCCCGCGCCTTCGTGCAGTCTTGCGAAGAACTGGGTGTGCCGACTGCGTTGGAGATTTCCAG
ATCAGGCGACGGTGCGCACGCGTGGGTGTTCTTCGCCAGTCGCGTCGCAGCACGCGATGCTCGGCGCTTGGGCACGGCCA
TCATCAGCCACACCTGCTCGCGCACCCGACAACTGAAGCTGAAGTCCTATGACCGGCTATTCCCGAATCAAGACACGATG
CCCAAGGGCGGGTTCGGCAACCTGATCGCCCTGCCACTGCAGAAGCAACCTCGCGAAAACGGCTGCAGCGTATTCGTCGA
TGCCGATCTGCGCCCGTATGCCAATCAATGGGGCTTTCTGGCGGGCATCCAACTGATGGCGGCGCACGACATCGAACCCA
CGATCCTGCGGGCCACCGGTGGCATTCATCCATTGGACGTCACCTTCATCGACGATGAGGACTTGGCCACGCCGTGGAAG
CGGGGTTCGTCTCCCAAGAAGCTGGGGGGCACTATGCCCACCTCGCTGACCGTGACGCTGGCCAATCTCGTCTACTTCGA
AAAGGCCCAACTGCCGCAGGTACTGGCCAACCGCCTGGTCCGTCTGGCCGCCTTCCAGAACCCCGAGTTCTACAAGGCCC
AGGCCATGCGGATATCGGTGTGGGATAAACCGCGCGTGATTGGCTGCGCGGAGAACTATCCGCAGCATATCGCCTTACCA
CGTGGCTGCCTCGACGCCGCATTAGACCTCCTGCGTGAGAACAGCATTTCCTGTGATCTCCGCGACGAGCGCTTTGGTGG
TGAAGCCATTGCAGTGAGTTTCCTCGGAACCCTGCGACTCGATCAGGAGGCTGCCGTCTCGGCCATGCTGCAGCATGATA
CCGGCGTGCTGTGCGCTCCGATCGCCTTTGGCAAGACAGTCACCGCCGCCGCGATGGTCGCGCGCCGGGGCGTCAACACG
CTGGTGCTGGTGCACCGCACCGAGCTGCTCAAGCAGTGGCAGGCGCGCCTGCAGGTTTTTCTAGGCCAGGGCAAGGGGGT
GGTCGGTACCATCAGCGGCGGGAAGGCCAAACCCGCCGGCAAGATCGACATAGCCGTGATGCAGTCGCTATCCCGGCAGG
GCGAGGTCAACTCCTTGGTTGAAAACTATGGCCAAGTCATTGTGGATGAGTGTCACCACGTTGGCGCCGTCTCCTTCGAT
GCCATCCTGAAGCGAACGAAGGCGAAGTATGTGCTCGGCCTTACCGCAACACCCATCCGCCGAGATGGGCAACAGCCGAT
CATCTTCATGCAATGTGGGCCGATTCGATACACCGCCGCCCAACCACTTGGAGCGCCTCACGACCTGAAGGTTCTTCCAC
ACTCACGGTGCACCCGGATCGAACTGCCGGCCACGGCCGGTATTCAGGACGTGTTCCGGTATCTTGCTAACGATCAGGCG
CGGACTGATGCCATTGCAATTGTAATCAAAGAAGCGTTTGAGCAGGGTCGTAAGGTGTTGGTGTTAACCGAGCGCACCGA
CCACCTAGCCGCAATTATGGCTGCTTTGGCGTGTCAAATCCCTGAACCGTTCATGCTGCACGGCCGGATGTCAAAGAAAC
AGCGGGCCGCCCTCATCGCCGATCTGAACGCACTGCCTCCCGATGCACCGCGCGTCCTTTTGGCTACCGGAAAACTGGTC
GGGGAGGGATTTGACCACCCACCGCTCGATACACTGGTGCTGGCCATGCCAGTTTCCTGGAAGGGTACGTTGCAGCAATA
CGCTGGGCGCCTCCACCGGGAGCACGCCAGCAAGACGGACGTGCGGATTATCGACGTCGTGGATACCGGCCACCCGGCGG
TGCTGCGGATGTGGGACAAGCGCCAGCGGGGGTACCGGGCAATGGGTTACCGAATTGCTGCGGAGGCCGTTGTGTCATGA

Protein sequence :
MGGDNQIFWLSVDSMADHGELAALQVENARLIALLEAHGIEWRLPWAPITAVREPESSKFSTAEKVALFRRLFRGRTDVY
PIRWESKTSDKAGYAPACANEWRAGVCEKPRIKCGNCSNRLLIPLSDAVIYDHLAGEHTVGVYPLLEDDTCYFLAADFDE
ADWRDDARAFVQSCEELGVPTALEISRSGDGAHAWVFFASRVAARDARRLGTAIISHTCSRTRQLKLKSYDRLFPNQDTM
PKGGFGNLIALPLQKQPRENGCSVFVDADLRPYANQWGFLAGIQLMAAHDIEPTILRATGGIHPLDVTFIDDEDLATPWK
RGSSPKKLGGTMPTSLTVTLANLVYFEKAQLPQVLANRLVRLAAFQNPEFYKAQAMRISVWDKPRVIGCAENYPQHIALP
RGCLDAALDLLRENSISCDLRDERFGGEAIAVSFLGTLRLDQEAAVSAMLQHDTGVLCAPIAFGKTVTAAAMVARRGVNT
LVLVHRTELLKQWQARLQVFLGQGKGVVGTISGGKAKPAGKIDIAVMQSLSRQGEVNSLVENYGQVIVDECHHVGAVSFD
AILKRTKAKYVLGLTATPIRRDGQQPIIFMQCGPIRYTAAQPLGAPHDLKVLPHSRCTRIELPATAGIQDVFRYLANDQA
RTDAIAIVIKEAFEQGRKVLVLTERTDHLAAIMAALACQIPEPFMLHGRMSKKQRAALIADLNALPPDAPRVLLATGKLV
GEGFDHPPLDTLVLAMPVSWKGTLQQYAGRLHREHASKTDVRIIDVVDTGHPAVLRMWDKRQRGYRAMGYRIAAEAVVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 71
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 71