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Name : rep [C] (TVNIR_3287) Accession : YP_007218405.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : DNA helicase II; NERD domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 3401800 - 3403569 bp Length : 1770 bp Strand : + Note : - DNA sequence : ATGACGGGAGGCGAAAAGCGCTTCGCCCGTCGCCTCGAGGCCAAGCTGGAGGACGACTATCTCGTTTGGTACGACGTTCC CGTGGGTTCCCGAGGCTTTCACCCCGATTTCATCGTGCTCCATCCGCGCCGTGGGCTACTGGTACTCGAGGTGAAGGACT GGCGCCTCGACACGATCAAGGCTATCCATCGGTTCAGGGCGTCCATCCTTACCGCCCGCGGGTTGGTGAGCGAGGCCAAC CCCCTGGAGCAGGCCCGAGGGTACGCCTGTGCGATTGCTTCCCTGCTCCAGAAAGACCCGGCCCTCGTCGCATCAGGGGG CCACCCGTACGCGGGCAAGCTGCTCTTCCCGTGGGGCTACGGGGCGGTGCTCGCCAACATCACGCGTAGGCAGTTCGAGT CGACCGATCTTGGCGAGGTGCTCGCGCCGCACCAGGTGATCTGCCAGGACGAGATTCTGGAGGACGTGGACACCGAAGCG TTCCAGCAGAAGCTCTGGGGAATGTTCTCCGTCCAGTTTGGCGAGGTGCTGACCCTGCCCCAGATCGACCGGATCCGATG GCACATCTTCCCGGAGATCCGAATCGGCGCTGCGCAGGCGGAACTGTTCGAAAACACGGAAGAGCCGCTGCCCGACCTGC TCCGCGTCATGGACCTACAGCAGGAACAACTCGCGCGCAGCCTTGGTGAGGGGCACCGCGTGATCCACGGTGTCGCCGGC TCCGGCAAGACAATGATCCTCGCCTACCGGTGCTTACACCTTGCGCGGGCGATGAACAGGCCCATCCTCGCGCTCTGCTT CAACGTGCCACTCGCCACCCGCCTCGAGGCTCTGCTGCGCGAGCAGGGGCTTGAGGACCAGGTGAGTGTGCGCAGCTTTC ACGCCTGGTGCCGGTCGCAGCTCGTCCACTATCACGTCCCGCTGCCGAGCGATGGCAAGGACTACGCTGACCAGCTTGTG CAGCGTGTGATCAAGGCAGTCGACCGCCAGCAGATTCCGGCCGGCCAGTACGGAGCCGTCCTCATCGACGAGGGACACGA CTTCGCCGCGCACTGGCTGAAGCTTCTCGCGCAGATGGTCGACCCCGCGACCAACGCCCTGCTGCTCCTGTACGACGACG CGCAGTCGATCTATGGCAAGAGCCGCCGCGGCAAGTTCAGCTTCAAGAGCGTCGGCATCCAGGCACAGGGCCGCACCACC ATCCTGAAGTTGAACTACCGCAACACGACCGAGGTGCTCAGGCTCGCCCATGCCTTCGCCAAGGACGTGCTGACACCTGC CGATGCCGACGAGGACGGGGTACCGCTCGTACTTCCGGAAAGCAGCGCCCGGCACGGTCCGCCCCCGGAACTTGTCCGAC TCCCGAGCTTCAGCGCCGAGGCCGACTACATTGCGGATCGCCTTTGCGCACTGCATGGCGAGGGCACCCCGTGGCGCGAC ATGGCGATTGTGTACCGAAACCACTTCATGGGCGAGAAACTCACCAGTCGCCTGGCAGCCGCCGGCGTCCCGGTCGACTG GCTCCATCGTTCGCATGACAGCCGCCGGTACCGCACCGGCGAGGACAGCGTGAAGGTCGTCACCTTCCACTCCAGCAAGG GCCTGGAATTTCCGGTCGTGGCTATCCCCGGGATGGGCTATCTGCCTCATGAGCACGACGACCCTGAAGACGAGGTCCGC CTCATGTACGTAGCAATGACACGAGCGATGGAACGGCTCGTGATCACATACCACCGGGAGTCGGCGTTTGTCGCGAGGTT GGCAAGGTGA Protein sequence : MTGGEKRFARRLEAKLEDDYLVWYDVPVGSRGFHPDFIVLHPRRGLLVLEVKDWRLDTIKAIHRFRASILTARGLVSEAN PLEQARGYACAIASLLQKDPALVASGGHPYAGKLLFPWGYGAVLANITRRQFESTDLGEVLAPHQVICQDEILEDVDTEA FQQKLWGMFSVQFGEVLTLPQIDRIRWHIFPEIRIGAAQAELFENTEEPLPDLLRVMDLQQEQLARSLGEGHRVIHGVAG SGKTMILAYRCLHLARAMNRPILALCFNVPLATRLEALLREQGLEDQVSVRSFHAWCRSQLVHYHVPLPSDGKDYADQLV QRVIKAVDRQQIPAGQYGAVLIDEGHDFAAHWLKLLAQMVDPATNALLLLYDDAQSIYGKSRRGKFSFKSVGIQAQGRTT ILKLNYRNTTEVLRLAHAFAKDVLTPADADEDGVPLVLPESSARHGPPPELVRLPSFSAEADYIADRLCALHGEGTPWRD MAIVYRNHFMGEKLTSRLAAAGVPVDWLHRSHDSRRYRTGEDSVKVVTFHSSKGLEFPVVAIPGMGYLPHEHDDPEDEVR LMYVAMTRAMERLVITYHRESAFVARLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 9e-108 | 41 |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 3e-108 | 41 |
