Gene Information

Name : yggS [C] (TVNIR_0298)
Accession : YP_007215490.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Unknown
Product : alanine racemase domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 292035 - 292748 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGACACAACTGGAAACGTGCTGGATCCAGGTGCACCAGCGGATCGAATCGGCCTGCCGGCTGGCAGGACGTGACCCCGA
CTCCGTGCAGCTGATTGCGGTGAGCAAGACGCGCACGGCCCGGGAAATCCTGGCATTGCATGCACTCGGGCAAGCGCGCT
TCGGGGAGAACTACGTGCAAGAGTTCGTTGCAAAATGGGAGGCGCTCACCCCCCGAGCCGTGGTGCCACCGTTGGAATGG
CATTTCATCGGCGCGCTGCAGCGCAACAAGACAAGGGCGGTGGCGGAACGCGCCGACTGGGTCCACAGCATCGACCGCCT
GAAGATCGCCCAGCGCCTGTCGGACCAGCGACCGGCCGATCGCCCCGCGCTACAGGTCTGCCTGCAGGTCGACCTGAGTG
GCGAACCCGGCAAGGCGGGAATCGCCGAGGCCGATCTGGAGCCACTGGCGGCGGCCACCGCGGAACTCCCCGGCCTCCGG
CTGCGGGGCCTGATGGCGCTGCCACCCCCCAGCACCGACCCGACCGAACAGCGGCGACCGTTTCGCCGCCTGCGGGAGCT
GCTCGACCGGCTGAACGCCAGAGGGCATCGACTCGACACTCTGTCGATGGGCATGTCGGGCGACCTGGAGGCGGCGATCC
TCGAAGGCGCCACCTTGGTCCGGGTCGGAACCGCACTCTTTGGCCCACGCAATGCGCAGGTGACACAGGCATGA

Protein sequence :
MTQLETCWIQVHQRIESACRLAGRDPDSVQLIAVSKTRTAREILALHALGQARFGENYVQEFVAKWEALTPRAVVPPLEW
HFIGALQRNKTRAVAERADWVHSIDRLKIAQRLSDQRPADRPALQVCLQVDLSGEPGKAGIAEADLEPLAAATAELPGLR
LRGLMALPPPSTDPTEQRRPFRRLRELLDRLNARGHRLDTLSMGMSGDLEAAILEGATLVRVGTALFGPRNAQVTQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-21 42
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-21 42
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-21 42
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-21 42