Gene Information

Name : zraR [H] (TVNIR_2766)
Accession : YP_007217885.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : sigma54 specific transcriptional regulator, Fis family ZraR - like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2851909 - 2852865 bp
Length : 957 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCAGTGACTTCGATGATCTGCTGATTGGCGATTCCCCGGAGCTGCGGGCGGTGGTAAACGCGGCCCGTATCGTGGC
CGAGGTGGATGTGACCGTACTGGTTCACGGGGAGAGCGGGACCGGGAAGGAACTCCTCGCGCGCGCGATCCACGGTAGCA
GCCGGCGCAGCCGCGCACCGATGGCCACGATCAACTGCGCCGCGTTGCCGGAGCAATTGATCGAATCCGAACTGTTCGGC
CATCGACGTGGCGCCTTCACCGGCGCGACCGGTGACCAGCCGGGACGCATCCGCAATGCCGCCGGGGGTACGCTGTTCCT
CGACGAGATCGGTGAGATGCCGCTTGCGAGCCAGGCCAAGCTGCTGCGCTTCCTCGAGACCGGCGAATGCCAGGCGATCG
GCCAGCCCAAACCAGAAAGGGTCGACGTGCGCGTGGTCGCCGCTACAAATCGCGATCTTCTCGCCGAGGTGCGCGAAGGC
CGCTTCCGGGAAGATCTCTACTATCGGCTCCACGTGGTGCCGCTCGAACTTCCACCACTGCGCGAACGTCGGGGCGATGT
CCCGATCCTGATCGAACACCTGACGCGCGCGCTGGCACGGCAGCACGGCCTCCCGCCCCCGATCTACCAAACCGATGCGC
TGCAGATCCTGGCCCGCTACCACTGGCCAGGCAACGTGCGCGAACTGCGCAATTTCTGCGAGCGCACGCTGATCCTCCTG
AAGGGTCAAGCCGTTCACGCCAGCAACCTGCCCCGGCAATTCACGGAACGCTCGGGTGGCGCAGCCGCCGGCGGCTATGC
ACTGCCCGACCAGGGGGTGCACCTCGAGACATTCGAGGTCGACCTGATCCGCCAGGCCCTGCAGAAGACGCAGGGCAACC
GGACGCGGGCGGCACAGCTCCTCGGGCTGAGCCGGGATACCCTGCAGTATCGTCTGAAGAAATACGCGATCGCCTAG

Protein sequence : 
MASDFDDLLIGDSPELRAVVNAARIVAEVDVTVLVHGESGTGKELLARAIHGSSRRSRAPMATINCAALPEQLIESELFG
HRRGAFTGATGDQPGRIRNAAGGTLFLDEIGEMPLASQAKLLRFLETGECQAIGQPKPERVDVRVVAATNRDLLAEVREG
RFREDLYYRLHVVPLELPPLRERRGDVPILIEHLTRALARQHGLPPPIYQTDALQILARYHWPGNVRELRNFCERTLILL
KGQAVHASNLPRQFTERSGGAAAGGYALPDQGVHLETFEVDLIRQALQKTQGNRTRAAQLLGLSRDTLQYRLKKYAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAC34753.1 HrpS Virulence Hrp PAI Protein 3e-36 43
hrpS NP_791207.1 type III transcriptional regulator HrpS Virulence Hrp PAI Protein 3e-36 42
hrpS AAC35800.1 transcriptional regulator Virulence Hrp PAI Protein 7e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
zraR [H] YP_007217885.1 sigma54 specific transcriptional regulator, Fis family ZraR - like protein BAC0467 Protein 5e-62 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
zraR [H] YP_007217885.1 sigma54 specific transcriptional regulator, Fis family ZraR - like protein VFG1214 Protein 8e-59 45