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Name : TVNIR_2516 (TVNIR_2516) Accession : YP_007217640.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Virulence Product : Fis family two component sigma-54 specific transcriptional regulator - like protein Function : - COG functional category : - COG ID : - EC number : - Position : 2602725 - 2604098 bp Length : 1374 bp Strand : + Note : - DNA sequence : ATGAGCATCAAGCATGTGCTGGTGGTGGATGACGAACCCGATATCTGCGAACTGCTGGAGATCACTCTGCAGCGCATGGG CATCGATACCACCACCACGACGCGCATGACCCGGACGATCGAACTGCTGGAAGAGCGCCGGTTCGACCTCTGCCTGACCG ACATGCGCATGCCCGATGGCGATGGGCTGGAGCTGGTGCGGCTGATCCAGGATCGATACCCTGAACTGCCCGTCGCGATC ATCACCGCCCACGGGAGCATCGACACCGCGGTGCAGGCACTGAAACTGGGGGCCTTCGACTTTGTCACCAAGCCGGTCGA TCTGAACCTGCTGCGCAGACTCATCGACAGCGCGTTGCGGCTGGGAGCGGGTGGCGCACCGGAGTCCGCCCAGGGATCGG GCGAAGGAGCACCGACCACCAACCCGCTGCTCGGGCGTTCGCCAGCGATGGTACAGCTGCGCAACCGGGTGGCACGCCTG GCCCGCAGCCAGGCACCGGTGATCATCCTGGGAGAGTCCGGGTCCGGTAAGGAACTGGTGGCCCGCGAGATCCACCGCCT GGGGCCGCGGGCCGGCGGGCCGTTCGTCCCGGTCAACTGCGGTGCGATCCCGGCCGAGCTGATGGAGAGTGAGTTCTTTG GCCATCAGAAAGGCGCGTTCACCGGCGCGGTGCGGACCCGGGTCGGCCTGTTCCGCGAAGCGCACGGCGGCACCCTGTTG CTCGACGAGGTGGCCGAACTCCCGCTTCCGCTGCAGGTAAAGCTGCTGCGTGCCCTGCAGGAACGGGCGATCAAGCCAGT GGGCGCATCGCGTGAAGAGCCGGTCGACGTGCGCATCCTGTCGGCGACCCATCGCGACCTTGCCGCGGATGTCGCGGAAG GACGTTTCCGACAGGATCTGTATTACCGGCTCAACGTGGTGGAGCTGCGGGTTCCGCCACTGCGTGAACGCCACGAGGAT CTCGAGGAACTGGCGCGGCACATTCTCGCGCGCATCGCCGGGGAGTGGGGGATTCCAGGTCTGTCGCTGTCCGAGGATGC GCTGGCACGGCTCAGGCAGCATCCGTTTCCGGGCAACGTACGCGAGCTGGAGAACATACTGGAGCGCGCCGCGGTCATGG TGGACGGGCGGGTCATCGACAGCAGCGCGCTCGATTTTCCGAACTGTTCCAGGGCTGGAACCGGGTCCGGCGGCAACCCC GCCACGGTCATGGAGGGCCAGGTCGCGCTGGACGACCACCTGGCCGAGCAGGAACGCCGCGCGCTGGAGGCTGCGCTGGC GCAGACCGCGGGCAACCGCACCGCGGCCGCCCGCGTGCTGGGTCTGAGCTTTCGGCAGATGCGCTATCGGCTGAAGAAGC TGGGCATCGACTGA Protein sequence : MSIKHVLVVDDEPDICELLEITLQRMGIDTTTTTRMTRTIELLEERRFDLCLTDMRMPDGDGLELVRLIQDRYPELPVAI ITAHGSIDTAVQALKLGAFDFVTKPVDLNLLRRLIDSALRLGAGGAPESAQGSGEGAPTTNPLLGRSPAMVQLRNRVARL ARSQAPVIILGESGSGKELVAREIHRLGPRAGGPFVPVNCGAIPAELMESEFFGHQKGAFTGAVRTRVGLFREAHGGTLL LDEVAELPLPLQVKLLRALQERAIKPVGASREEPVDVRILSATHRDLAADVAEGRFRQDLYYRLNVVELRVPPLRERHED LEELARHILARIAGEWGIPGLSLSEDALARLRQHPFPGNVRELENILERAAVMVDGRVIDSSALDFPNCSRAGTGSGGNP ATVMEGQVALDDHLAEQERRALEAALAQTAGNRTAAARVLGLSFRQMRYRLKKLGID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 1e-94 | 47 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 1e-94 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TVNIR_2516 | YP_007217640.1 | Fis family two component sigma-54 specific transcriptional regulator - like protein | BAC0089 | Protein | 6e-66 | 46 |
| TVNIR_2516 | YP_007217640.1 | Fis family two component sigma-54 specific transcriptional regulator - like protein | BAC0467 | Protein | 5e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TVNIR_2516 | YP_007217640.1 | Fis family two component sigma-54 specific transcriptional regulator - like protein | VFG1214 | Protein | 8e-116 | 60 |
| TVNIR_2516 | YP_007217640.1 | Fis family two component sigma-54 specific transcriptional regulator - like protein | VFG1249 | Protein | 2e-65 | 44 |
| TVNIR_2516 | YP_007217640.1 | Fis family two component sigma-54 specific transcriptional regulator - like protein | VFG0116 | Protein | 9e-62 | 43 |
