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Name : clpB [H] (TVNIR_2481) Accession : YP_007217605.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 2563046 - 2565619 bp Length : 2574 bp Strand : - Note : - DNA sequence : ATGCGTATGGATCGACTGACCACGAAATTCCAGGAGGCCCTGGCCGACGCGCAGTCGCTGGCCGTCGGCCGCGACCACCA GTTCATCGAGCCGGTGCACGTGCTCGCCGCGCTGCTGAACCAGGAGGGCGGTACCGCAAGGCCGGTACTGGCCCAGGCCG GTGGCAACGTGAACCAACTGCGTTCGGCGCTCGACGACGCGCTCGGGCGTCTGCCACGGGTCGAGGGCACGCCCGGCGAG GTGCATGTCTCGAACGACCTGAACCGGCTGCTGAACGTGTCCGACAAGCTGGCCCAGCAGCGCAAGGACCAGTACATCTC CTCGGAGCTGTTCCTGCTCGCGGCGGTGCAGGACCGCGGCCCTGCGGCCGAAATCCTGAAACGGGCGGGCGTGACGCCGG GTGCGCTGGAGAAGGCGGTGGAGCAAATGCGCGGCGGCGCCAGTGTCGACGACCCCAGCGCCGAGGATACCCGCCAGGCT CTGGAGAAATACACCATCGACCTGACCGAGCGCGCCGAGCAGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGAGAT TCGCCGCGCGGTTCAGGTACTGCAGCGGCGCACCAAGAACAACCCGGTATTGATCGGCGAACCCGGCGTCGGCAAGACCG CGATCGTCGAGGGACTCGCGCAGCGCATCATCAACGGCGAGGTGCCCGAGGGCCTGAAGGACAAGCGCGTGCTGGCGCTG GATCTCGGTGCATTGCTCGCCGGGGCCAAGTATCGCGGCGATTTCGAGGAGCGGCTGAAGTCGGTGTTGAAGGACCTCGC GAAGGAAGAGGGCCGGGTGATCCTGTTCATCGACGAACTGCACACGATGGTCGGCGCCGGCAAGGCCGAGGGCGCGATGG ATGCGGGCAATATGCTGAAGCCGGCGCTGGCCCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTGGACGAGTACCGC AAATACATCGAGAAGGACGCGGCACTCGAGCGCCGCTTCCAGAAAGTGCTGGTCGACGAACCGACGCTGGAGGACACGAT CGCGATCCTGCGCGGCCTGAAGGAGCGCTACGAGGTGCACCACGGGATCGAGATCACCGACCCGGCGATCGTCGCGGCGG CGCAGCTGTCGCAGCGCTATATCACCGATCGGCAGCTGCCGGACAAGGCGATCGACCTGGTCGACGAGGCCTCCTCGCGC ATCCGCATGGAGATCGACTCCAAGCCCGAGGAGATGGACCGGCTCGATCGCCGGCTGATCCAGCTGAAGATCGAGCGCGA GGCGATGAAGAAGGAGACCGACGAGGCCTCGCGCAAGCGCCTGGACGCACTCGAGGACGAGATCGAGCGGCTCGAGCGCG AGTACTCGGATCTCGAGGAGATCTGGAAGTCCGAGAAGGCGGCGGTGACCGGCGCCGCGCAGATCAAGGAAGACCTCGAG CGCGCGCGCATGGAACTGGAGACCGCGCGCCGCGCCGGCGACCTGAACCGGATGTCGGAGTTGCAGTACGGGCGCATCCC CGAGCTGCAGAAGGCGCTCGAGCAGGCTGCGGAGCTGGAGACCCGCGAGACGCGTCTGCTGCGCAACAAGGTCACCGACG AGGAAGTCGCCGAAGTCGTTTCGCGATGGACCGGCATCCCGGTGTCCAAGATGCTCGAGGGCGAGAAGGACAAGCTGCTG CGCATGGAAGAGGCGGTCGGCCAACGCGTGGTCGGCCAGGACGAAGCGGTGCGTGCGGTCGCGAACGCGATCCGGCGCGC CCGTGCCGGGCTGTCGGATCCCAACCGTCCGAGCGGATCGTTCCTGTTCCTCGGCCCGACCGGTGTCGGCAAGACCGAGC TGACCAAGGCGCTGGCCGCGTTCCTGTTCGACACCGAGGACGCGATGGTCCGGATCGACATGTCCGAGTTCATGGAGAAG CACTCCGTCGCGCGGATGATCGGCGCGCCGCCGGGCTACGTCGGCTACGAAGAGGGCGGGTACCTGACCGAGGCGGTGCG GCGCAAGCCCTACTCGGTGATCCTGCTCGACGAGGTCGAGAAAGCCCACCCGGATGTGTTCAACGTATTGCTGCAGGTGC TCGACGACGGGCGCCTGACCGACGGCCATGGCCGCACCGTGGACTTCCGCAACACCGTGATCGTGATGACCTCGAACCTC GGGTCGCAGTTGATTCAGGAGATGGCGGGCGAGGAGCACTATGCCCAGATGAAGGCTGCGGTGATGGAGGTCGTCGGGAG CCATTTCCGGCCCGAGTTCATCAACCGCGTCGACGACGTGGTCGTATTCCACCCGCTGGGCCGCGAGCAGATCCGGGCGA TCACCGACATCCAGCTGCGGCTGCTGCGCCAGCGGCTCGCCGAGCGCGACATCGCGTTCGAGGTCAGCGAGGCCGCGCTC GACCGGCTCGGCGAGGCCGGGTTCGACCCGGTCTACGGCGCCCGCCCGCTGAAGCGCGCGATCCAGCACCAGGTCGAGAA CCCGCTGGCCCAGGCGCTGTTGTCGGGTCGCTTCTCGCCCGGCGACACCGTGCATGTCGATGTCGGCGAAGGCGGCTTGG TGTTTCGGCCGTGA Protein sequence : MRMDRLTTKFQEALADAQSLAVGRDHQFIEPVHVLAALLNQEGGTARPVLAQAGGNVNQLRSALDDALGRLPRVEGTPGE VHVSNDLNRLLNVSDKLAQQRKDQYISSELFLLAAVQDRGPAAEILKRAGVTPGALEKAVEQMRGGASVDDPSAEDTRQA LEKYTIDLTERAEQGKLDPVIGRDDEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLAL DLGALLAGAKYRGDFEERLKSVLKDLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQRYITDRQLPDKAIDLVDEASSR IRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRKRLDALEDEIERLEREYSDLEEIWKSEKAAVTGAAQIKEDLE RARMELETARRAGDLNRMSELQYGRIPELQKALEQAAELETRETRLLRNKVTDEEVAEVVSRWTGIPVSKMLEGEKDKLL RMEEAVGQRVVGQDEAVRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTELTKALAAFLFDTEDAMVRIDMSEFMEK HSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNL GSQLIQEMAGEEHYAQMKAAVMEVVGSHFRPEFINRVDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIAFEVSEAAL DRLGEAGFDPVYGARPLKRAIQHQVENPLAQALLSGRFSPGDTVHVDVGEGGLVFRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-155 | 45 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 4e-97 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-97 | 41 |
