Gene Information

Name : TVNIR_2434 (TVNIR_2434)
Accession : YP_007217558.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2506447 - 2507169 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAGCGAACCGAACTCAGTGCTCGATTGCCGCGCCCTCGGTTTTTCCTATTTCGGGGGCGGAGGCAGCATCCCCGT
GTTGCATGCGCTCGACCTGCAACTCGCGCCTGGCGAGCGCGTCGCGATCGTCGGCGAGAGCGGCAGCGGCAAATCGACAC
TGCTGCACCTCGCCGCGGGTCTCGAACGCCCGACCTCGGGAAGCGTGCGTCTGAACGGGGTCGACCTGGGAACCCTGGAC
GAGCGGGAACGCACGCTGCGCCGCCGGCGGGAAGTCGGGATCGTGTTCCAGGCGTTCCACCTGATTCCGACACTTACCGC
CGCCGAGAACGTGGCACTGCCGTTGGAACTCGCCGGCCTGGCGCTTGGACGCGAGGCGCGAACCCGGGGGCACTCCGAAC
TTGCGGGCGTGGGCCTGGCGGACAAGGCGGATCGTTACTCCGAACAACTCTCCGGCGGCGAGCAGCAGCGGGTCGCGATT
GCCCGGGCGCTGGTGCACCGCCCCCGCCTGATCTTGGCCGACGAGCCCACGGGGAACCTTGACTCGAACACCGGCGAGGC
GGTGTTTCGCCTGCTGCTCGCGCGGGTGGAGGCAGCCGGAAGCGCGCTGCTGATGGTCACCCACAGCGACGCCCTCGCCG
CGCGGCTGGACCGCACCGTGCGGATGGTCGACGGACGCCTGCTGGACCACCCGTCGCGAGCTGCGGTCGGTACTGAACGA
TGA

Protein sequence : 
MASEPNSVLDCRALGFSYFGGGGSIPVLHALDLQLAPGERVAIVGESGSGKSTLLHLAAGLERPTSGSVRLNGVDLGTLD
ERERTLRRRREVGIVFQAFHLIPTLTAAENVALPLELAGLALGREARTRGHSELAGVGLADKADRYSEQLSGGEQQRVAI
ARALVHRPRLILADEPTGNLDSNTGEAVFRLLLARVEAAGSALLMVTHSDALAARLDRTVRMVDGRLLDHPSRAAVGTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 9e-17 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_2434 YP_007217558.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-28 50
TVNIR_2434 YP_007217558.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-29 42
TVNIR_2434 YP_007217558.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-26 42