Gene Information

Name : ybbA [H] (TVNIR_1986)
Accession : YP_007217128.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2019155 - 2019862 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
ATGGATGCAACCTCGAACTCCATCGTGCAGGCACAGGGCCTGGAAAAGCGGATCGACGGACCCAGCGGCCCGCTGGACAT
TCTGCGCGGAATCACGCTCGCGGTCGCGCCGGGCGAGAGCGTTGCGATCCTCGGCGCCTCCGGCTCGGGCAAGTCGACCT
TGCTGGGACTCCTTGCCGGTCTGGACGCTCCGAGTGCCGGAGAAGTTCGCCTGCTCGGCGAGAACATCGGCCAACTCGAC
GAGGACGGTCGCGCGGCGCTGCGCGCAGGAAGCGTCGGCTTCGTGTTCCAGTCGTTCCAGTTGCTGCCGGCACTGACCGC
TTTGGAGAACGTGGTATTGCCGCTCGAACTCAACCCCGCCCACGATGGCCTGGCGTCGACGGCAATCACCGCGCGGGCGC
GAGAAGCGCTGGATCAGGTCGGGCTGGCCGCGCGCGCAGCGCACTACCCGTATCAGCTCTCCGGCGGCGAACAACAGCGG
GTGGCCATTGCGCGGGCGATCGTGGACCGCCCGGCAGTGCTGTTCGCCGACGAGCCCACCGGCAACCTCGACGCCGACAC
CGGCACCCGCATCATCGACCTGCTGTTCCGCCTGGCCGGCTCGGGCGATGCGGGCACCGGGGCCGCGATGGTGCTGGTCA
CCCATGACCCGGCGCTGGCCGAGCGCTGCGACCGCGTGATCCACCTCCAGGACGGGATCCTGGCATGA

Protein sequence :
MDATSNSIVQAQGLEKRIDGPSGPLDILRGITLAVAPGESVAILGASGSGKSTLLGLLAGLDAPSAGEVRLLGENIGQLD
EDGRAALRAGSVGFVFQSFQLLPALTALENVVLPLELNPAHDGLASTAITARAREALDQVGLAARAAHYPYQLSGGEQQR
VAIARAIVDRPAVLFADEPTGNLDADTGTRIIDLLFRLAGSGDAGTGAAMVLVTHDPALAERCDRVIHLQDGILA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-24 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-26 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-26 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA [H] YP_007217128.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-30 47
ybbA [H] YP_007217128.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 1e-27 46
ybbA [H] YP_007217128.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 4e-24 43