Gene Information

Name : TVNIR_0019 (TVNIR_0019)
Accession : YP_007215215.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Unknown
Product : Il-IS_2, transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 15396 - 16754 bp
Length : 1359 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGCCAACATCCTGAACCTCCCCGACTTCAAAGTGCAGCGGGTCGAGGAAGCCGACCACGACTATCACGTCTACGC
CGAAGTCTCGAACCCTCCAGGTGGTGTCTGCACGGCCTGCGGCTCTGATCATCTGATCGGCCACGGGCGCAACGAGCAGG
TGATCCGCGACGTGCCCACCCACGGCAAGCGTCTTGCGATCTACGTGGACACCCGCCGCTGGCGGTGCCAGTCTTGCGGC
AAGACCTTCATGCAGGCAGTGCCCGCCGTCAACGCCAAGCGCGAAATGACCGATCGGCTGGTGCGCTGGATCGGTCAGCA
GAGCTTGAAGCGGACGTTTGCCAGCATCGCGGGCGATACCGGCCTCGATGAGAAGACCATCCGCAACATCTTCCGCGACT
ACATCAACGCGCTGGAATCCGAATTCCGCTTCGAGACGCCGCAGTGGATGGCAATTGACGAAATCCACATCATCAACAAG
CCCCGTTGCGTCGTCTCGAGCATCCAAAACAACACCATCGTGGACCTGCTCCACAACCGGAACAAGGACACGGTGGCCAA
GTACCTGTGCAAGATTCCGAACCGGGACAAGGTGCAGTACGTGGCGATCGATATGCGGACGCCGTACCGCGATGCGGTGA
GCGCGGAGCTGCCAGAAGCTAGCATCATCATCGACAAGTTCCACGTTGTCCGCATGGCGAATGAAGCCGTGGAAAAGGTC
AGGAAGAGCCTGCGTGAGCAACTGACGCCCCAGCAGCGACGGGGCTTGATGCATGACCGTTTCGTGCTTTTGAAGCGCGA
GCGCGATCTGGACGACAAGGAAGCGCTGCTGCTCGATGGTTGGACGAAGAACTACCCCGAGTTGGGAGCCGCGTACAGGC
TCAAGGAAGATTTCTACGCCGTCTATGAAGGGTCAGATAGCCCCGAGGCCGCCCTGGCGGCCTATGAGGCTTGGAAGAAG
GCCGTGGTGCCCGAGGTGCGGGACGCCTTCGACGATCTGATGCGGGCCTTCACCAACTGGCAGCCCTTCATCCTCAACTA
CTTCGAGCACCGCGTCACAAATGCCTACACCGAGAGCCTGAACCGCCTAAGCCGCGTTGTGAACCTACTGGGGCGGGGCT
ATAGCTTTGAGGCGCTGCGGGCCAAGATTCTGTTCACCAAGGGTGCACACAAGCACAAGCTCAGTTGCCGGAAGTTCGAG
CGGCGGCGTGAGCCTGAGCCGGAACTGGCTGCCGCAGAGAAAGCGGCGAGAGTTGGACTGCCAGAGACCTACGACCCACA
CAAGCACGAGAAGCCGCAGAAGAACTACGGGGCCGACCTAAACACGCTGATCGAGCTGCTGGAATCCGGGCGGCTGTGA

Protein sequence :
MPANILNLPDFKVQRVEEADHDYHVYAEVSNPPGGVCTACGSDHLIGHGRNEQVIRDVPTHGKRLAIYVDTRRWRCQSCG
KTFMQAVPAVNAKREMTDRLVRWIGQQSLKRTFASIAGDTGLDEKTIRNIFRDYINALESEFRFETPQWMAIDEIHIINK
PRCVVSSIQNNTIVDLLHNRNKDTVAKYLCKIPNRDKVQYVAIDMRTPYRDAVSAELPEASIIIDKFHVVRMANEAVEKV
RKSLREQLTPQQRRGLMHDRFVLLKRERDLDDKEALLLDGWTKNYPELGAAYRLKEDFYAVYEGSDSPEAALAAYEAWKK
AVVPEVRDAFDDLMRAFTNWQPFILNYFEHRVTNAYTESLNRLSRVVNLLGRGYSFEALRAKILFTKGAHKHKLSCRKFE
RRREPEPELAAAEKAARVGLPETYDPHKHEKPQKNYGADLNTLIELLESGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03510 YP_005176249.1 transposase tnpA Not tested ICEPmu1 Protein 3e-107 53
tnpA AGK36656.1 transposase of ISL3 family Not tested AbaR26 Protein 3e-72 42
1_52 CAJ77024.1 Transposase Not tested AbaR1 Protein 3e-72 42
1_386 CAJ77097.1 Transposase Not tested AbaR1 Protein 3e-72 42
tpnA ADI24144.1 transposase Not tested AbaR1 Protein 3e-72 42
tpnA ADZ05772.1 transposase Not tested AbaR11 Protein 3e-72 42
tnpA ACN81032.1 transposase of ISL3 family Not tested AbaR5 Protein 4e-72 42
tnpA ACS32044.1 transposase of ISL3 family Not tested AbaR5 Protein 4e-72 42