|
Name : TVNIR_1836 (TVNIR_1836) Accession : YP_007216978.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Virulence Product : UDP-glucose dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.22 Position : 1848652 - 1849983 bp Length : 1332 bp Strand : - Note : - DNA sequence : ATGTCCGGAAACGAAACGCTTGCCGTGATCGGCCTCGGCTACGTCGGTCTGCCGCTGGCGGTGGAGTTCGGGCGCCGCCG CCGGGTGATCGGCTTCGACAAGAGCGCCGAGCGAATCGCCGAACTGCGCGCCGGTCGTGACAGTACGCTAGAGGTGGAGG CTGCGGACCTGGCCCAGGCCACCGGCCTCGAGTTCACCACCGATCCGCGGCAGTTGCGCGAGGCGACCATCTACATCGTC ACGGTACCCACGCCCATTGACGCGGGCCGGCAGCCGGATCTGGCGCCGCTGATGCATGCGAGCGAGACGATCGGCCGGGT GCTGAAGCCGGGTGACACCGTGATCTACGAGTCCACGGTGTACCCGGGAGCGACCGAGGAGGTCTGCGTGCCGATCCTGG AACGGTCCTCCGGGTTGCGCTACATCAGCACCGAGAGGAGGGGGACCGATCCAGAACTGCCCCCCGGACAGACCGTGGCC GCTGACAACGGCTTCTACTGCGGCTACAGCCCCGAGCGTATCAACCCGGGTGACCGCGAGCATCGCGTGACCACCATCCG CAAGGTCACCAGCGGCTCGACGCCCGAAGTCGCCGAGCGCGTGGACGCCCTCTACCGCGAGATCATCACCGCCGGCACCC ACAAGGCGTCGAGCATCCGCGTGGCCGAGGCGGCGAAGGTCATCGAGAACACCCAGCGCGACGTGAACATCGCGCTGATC AACGAACTCGCACTGATCTTCAACCGCCTGGGTATCGACACCGAGGAGGTGCTGCAGGCGGCCGGCACCAAGTGGAACTT CCTGCCGTTCCGTCCGGGCCTGGTCGGCGGCCATTGCATCGGCGTCGACCCGTACTACCTCACCCACAAGGCGCAGCAGA TCGGCTATCACCCGGAGATGATCCTGGCAGGCCGGCGCATCAACGACGGCATGGGCGCTTACGTCGCCGGCCAGCTGGTG AAGGCCATGCTCAAAAAGCGTATCCAGGTGGAAGGCAGCCGGGTGCTGGTGATGGGGCTCACGTTCAAGGAGAACTGTCC GGACCTGCGCAATACTCGCGTGGTGGACATCCTGCATGAACTGGCCGAGTACGACGTGCAGGTGGACGTCTGCGACCCTT GGGCCAGCGTCGAGTGCGCCCGCCGCGAATATGGTATCGAGCTGATCCGTGGCCCCGAACCCGGGCAGTACGACGCCATC GTGCTCGCGGTGGCGCACCGCCAGTTCAACGCGATGGGCGTTTCCGGGATCCGCGCCCTCGGCAGGCCCCGGCACGTGCT CTACGACCTCAAATACGTCTTCCCCGCGAACGAGACCGATCTGCGCCTGTAG Protein sequence : MSGNETLAVIGLGYVGLPLAVEFGRRRRVIGFDKSAERIAELRAGRDSTLEVEAADLAQATGLEFTTDPRQLREATIYIV TVPTPIDAGRQPDLAPLMHASETIGRVLKPGDTVIYESTVYPGATEEVCVPILERSSGLRYISTERRGTDPELPPGQTVA ADNGFYCGYSPERINPGDREHRVTTIRKVTSGSTPEVAERVDALYREIITAGTHKASSIRVAEAAKVIENTQRDVNIALI NELALIFNRLGIDTEEVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQQIGYHPEMILAGRRINDGMGAYVAGQLV KAMLKKRIQVEGSRVLVMGLTFKENCPDLRNTRVVDILHELAEYDVQVDVCDPWASVECARREYGIELIRGPEPGQYDAI VLAVAHRQFNAMGVSGIRALGRPRHVLYDLKYVFPANETDLRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-133 | 61 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-133 | 61 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-108 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TVNIR_1836 | YP_007216978.1 | UDP-glucose dehydrogenase | VFG0431 | Protein | 3e-133 | 61 |
