Gene Information

Name : TVNIR_1517 (TVNIR_1517)
Accession : YP_007216665.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : putative transcriptional regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1501114 - 1501770 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence : 
GTGACCGATGCGGGGGCAGTGGTTCTGGTCGACGACGACCCGGCAATGCGCCGTTCGCTGGCGCTGGCGCTCAGTCTGGC
GGGCTACGAGGTGAAGGCGTTCGCATGCGCCGGGGATCTGTTGCGTGATCTGGATCCGGAACAGGTCGGTTGCCTGCTGC
TGGACCTGCGCATGCCCGACATGAGCGGTCTCGAACTCCAGCAGGAATTGTTGCAACGGGGCTGCGTGCTGCCGGTGATC
TTCATGTCGGCTTTCGGCGATATCCCGACGACCGTGCGCGCGCTGAAGGGCGGAGCGCTGGATTTCCTGGAGAAGCCGTT
TTCCACCGAGTCGCTGATCACCCGGGTCGAGGAAGCCTTCGCCATCGATGCGGCACTGCGTGCGGACCGGGACTGGCGCC
TGAGCATTGCCGAACGCGCCCGTCAGCTGACCAGGCGGGAACGCGAGGTCATGGCGCTGGTTACCGAGGGGTTGAGCAAC
AAGGAGATCGCGCGGCGTTTCGAGATCAGCCCGCGCACGGTCGAGAAATACCGGGCGCGGGTCATGGAGAAGATGCAGGC
CGCCAATCTGGCCGATCTCTGCCAGATGGCCGGGGCCGTTCCGGTCACGCCCGACGGCCTTGATGTCCCACGGCTCCTGG
AACCTAGACCCGGGTAG

Protein sequence : 
MTDAGAVVLVDDDPAMRRSLALALSLAGYEVKAFACAGDLLRDLDPEQVGCLLLDLRMPDMSGLELQQELLQRGCVLPVI
FMSAFGDIPTTVRALKGGALDFLEKPFSTESLITRVEEAFAIDAALRADRDWRLSIAERARQLTRREREVMALVTEGLSN
KEIARRFEISPRTVEKYRARVMEKMQAANLADLCQMAGAVPVTPDGLDVPRLLEPRPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 5e-23 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 5e-23 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 5e-23 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-23 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 5e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TVNIR_1517 YP_007216665.1 putative transcriptional regulatory protein VFG0488 Protein 2e-23 42