Gene Information

Name : mutS [H] (TVNIR_1451)
Accession : YP_007216602.1
Strain : Thioalkalivibrio nitratireducens DSM 14787
Genome accession: NC_019902
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1426269 - 1428965 bp
Length : 2697 bp
Strand : -
Note : -

DNA sequence :
GTGTGGCGCCATGGCGGGCACCTGACCCGGCGACGAACCGCCGCACCGCGGCGTGACAGCGACCAGGCGCGGGCCGCGCA
GCGCGCCCGCGCGCGTTCACAGGCGAGCCCCGACGTGACCGATCCAGATCCTTTGACCGCCCACACCCCGATGATGCAGC
AGTACCTGCGCATCAAGGCAGAGTATCCGGATACGCTGCTGCTGTACCGCATGGGCGATTTCTACGAGTTGTTCTACGAG
GACGCCCAGCGGGCATCGGAACTGCTGGACATCACTCTGACCCGGCGCGGCGAATCCGCCGGACGGCCGATCCCGATGGC
TGGGATTCCGGTGCACACCCTGGAAAGCTACCTCGCGCGACTGATGAAAAAGGGACTCGCGGTCGCCATCTGCGAGCAGA
CCGGGGAACCGGGGGCTGGCAAGGGACCCATGCAGCGAGAGGTCGTCCGGATCGTGACTCCGGGTACCCTCGCGGAAGAG
GCGCTGCTGGACGCGCGCGAGCTCAATCTCATCGTCGCCGTAAGCCCCCACCCTGCAGAGGGGTGCTTCGGACCCGCGGG
TGTTGCGATCCTGGAGTTCGCCAGCGGGCACTTCAGCGTGCTGGAGGTTGCGGACGAGGCGGCATTACAGGCCGAACTGG
CTCGGCTGAGCCCGGTGGAATGCCTGGTTCCCGAAGGTTTCGCCGATCGGGTTCCCGGCAGCCAGACGCTGCCGGAGTGG
CATTTCGACCCGGTCTCCGCAACCCGCGTGCTGACCGCGCATTTCCGGACCCGGGATCTTGCCGGATTTGGCTGCGACGA
CCTGCCACTGGCGCTGGCAGCGGCTGGTGCCCTGCTCGCCTACGTGCAGACACGCTACCGCGGCGAGCTGGGCCACATCA
CCGGGCTGAGCCGCGAATCGCGCGCGGCCACGGTGGAGATGGACCCCGCCACGCGCCAGAATCTCGAACTGACCCGCACC
CTCTCCGGGCAGCGCACCGGCAGTCTGCTTGCACTCCTGGACTGCACGCGCACCGCTATGGGGGCACGACTGCTCGGGCG
CTGGCTGGGCCAGCCGTTGCGGGAACGCGCGCGGATCCGCGAACGGCACGCGGTGGTGCGCGAACTCATCGACGGCGGCG
GGTACCGGGACCTGCGCCAGCTGCTGGCAGGGGTCGCCGACTGCGAACGCATCGTCAGCCGCATCGCGCTCAGCACGGCG
CGCCCGCGCGATCTGGTCGCGCTTCTGGTCAGTCTCGAACGCCTGCCCGCACTGCATCAGACCTTACCGGGGGATCTGCC
GCCGTCGGTGCTGAACGGGATCCGCGAACGGCTGCAGCCGCGGGCGGCGCTTGCGGAGTTGCTGCGCCGGGCGCTGGAGG
AACAGCCGCCACTACGGGTCAGCGACGGCGGGGTCATCCGCCCTGGGTTCGACCCGGAACTGGATCGCCTGCGCGGCATG
CAGGCAGACGCCGACCGCTTTCTGCGTGCGATCGAGGCGCGGGAGCGCGAGGCGACGGGCCTCGCCCAGATGAAAGTGGC
GTACAACCGCGTCCACGGCTACTACATCGAGGTGCCGCGCAGTCTGTCCGAACGGGTACCGGCACGCTTCATGCGGCGCC
AGACGCTGAAGAACGCCGAACGCTACACCACCGAGGAACTCAAGCAGTTCGAGGACGAGATCCTCTCGGCCCGGGATCGC
GCGCTGAGCCTGGAACGCGAGTTGTACGAACGGCTGCTCGAGGATCTGCAGCGGGAGATCGATTCGCTGCGCGCTGTTGC
CGATGCGCTCGCTGAACTCGACGCGTTCTGTGCGCTCGCCGAGAATGCCGTGCGCCGGGACTGGGTCTGTCCCGAGATCA
GCGACGAGCCGGGCATCGTGATCGAAGCGGGGCGACACCCGGTGGTGGAGTCGGCACGGCAAGACCCGTTCGTACCCAAC
GACCTGCGGCTGGATCCGGAGTCGCGGCGTCTGCTGGTGATCACCGGACCCAACATGGGCGGCAAGTCGACCTACATGCG
CCAAGCCGCGCTGATCGTGATCCTGGCCTGCATCGGCAGTTTCGTGCCTGCCCGGGCCGCGCGGATCGGGCCGGTGGACC
GCATCTTCACCCGGATCGGCGCCTCCGACGATCTAACCTCCGGTCGCTCCACTTTCATGGTGGAAATGACCGAGGCGGCC
AACATCCTGAACAACGCCGGGCCGGAAAGCCTGGTCCTGATGGACGAGATCGGCCGCGGCACCAGCACCTTCGACGGCCT
CGCGCTGGCGCTGGCATGCGCCGAGCGCCTGGCCCGGCAGAATCGGTCGATGACACTGTTCGCGACGCATTACTTCGAGC
TCACGACGCTCGCCGAGCGCGAGCGCGGTGTGGCGAACGTGCACACCGATGCGATCGAGCACCGCGACACGGTGGTCTTC
CTGCATCAGGTTCAGGAGGGACCGGCGAACCAGAGCTATGGCCTGCAGGTGGCGGCCCTCGCCGGGGTACCCGCGTCGGT
GCTCAAGCGCGCCCGCCAGCACCTCGCGGAGCTGGAATCCAGGGCACTGGCGGCGGCCGACCCGACCCAGCTCGCGTTGT
TCGCCCCGTCGCCCGCGATCGCCGAGCCCGGGCCGGCAGACGCCGTGGTCGAGGCGCTCGAAGCGCTGGATCCGGACCGG
TTGACCCCGCGCGAAGCGCTGGACGCGCTCTACCGTCTGCGCGAACTGTTAACGTGA

Protein sequence :
MWRHGGHLTRRRTAAPRRDSDQARAAQRARARSQASPDVTDPDPLTAHTPMMQQYLRIKAEYPDTLLLYRMGDFYELFYE
DAQRASELLDITLTRRGESAGRPIPMAGIPVHTLESYLARLMKKGLAVAICEQTGEPGAGKGPMQREVVRIVTPGTLAEE
ALLDARELNLIVAVSPHPAEGCFGPAGVAILEFASGHFSVLEVADEAALQAELARLSPVECLVPEGFADRVPGSQTLPEW
HFDPVSATRVLTAHFRTRDLAGFGCDDLPLALAAAGALLAYVQTRYRGELGHITGLSRESRAATVEMDPATRQNLELTRT
LSGQRTGSLLALLDCTRTAMGARLLGRWLGQPLRERARIRERHAVVRELIDGGGYRDLRQLLAGVADCERIVSRIALSTA
RPRDLVALLVSLERLPALHQTLPGDLPPSVLNGIRERLQPRAALAELLRRALEEQPPLRVSDGGVIRPGFDPELDRLRGM
QADADRFLRAIEAREREATGLAQMKVAYNRVHGYYIEVPRSLSERVPARFMRRQTLKNAERYTTEELKQFEDEILSARDR
ALSLERELYERLLEDLQREIDSLRAVADALAELDAFCALAENAVRRDWVCPEISDEPGIVIEAGRHPVVESARQDPFVPN
DLRLDPESRRLLVITGPNMGGKSTYMRQAALIVILACIGSFVPARAARIGPVDRIFTRIGASDDLTSGRSTFMVEMTEAA
NILNNAGPESLVLMDEIGRGTSTFDGLALALACAERLARQNRSMTLFATHYFELTTLAERERGVANVHTDAIEHRDTVVF
LHQVQEGPANQSYGLQVAALAGVPASVLKRARQHLAELESRALAAADPTQLALFAPSPAIAEPGPADAVVEALEALDPDR
LTPREALDALYRLRELLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 2e-170 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS [H] YP_007216602.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 52