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Name : lysS [H] (TVNIR_1437) Accession : YP_007216588.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1411447 - 1412967 bp Length : 1521 bp Strand : + Note : - DNA sequence : GTGACCGCGATGGATGCCCATCACGACAGCGACAGCGGGCGGGTCGACGAGAACAAGCTGATCGCGCAGCGCCGTGACAA GCTGGCCGCGCTGCGGGTGGAGGGTCCGGCGTTCCCGAACGACTTCCGGCGGGATGCCCTCGCCGGCGATCTGCACGCCC GCCACGATTCCGCGGAGCCGGCAGCCCTCGACGCGACAGCGCTCAAGGTGGCGGTGGCCGGTCGCATGATCGGCAAGCGG GTGATGGGCAAGGCCAGCTTCGTGACGCTGCGCGACCTGTCTGGCGACATCCAGCTGTTTGTGCAGCGCGACGCGCTGCC GGAGGGCGTGTACGCCGCGTTCAAGCAATGGGATCTCGGCGACGTGCTCGGCGCGCGTGGCACATTGTTCAAGACACGCA CCGGAGAGCTGTCGATCCAGGTGCGGGAACTTCGGCTGTTGACCAAGAGCCTGCGACCGCTGCCGGAGAAGTTCCACGGG CTGTCCGACCAGGAAACGCGTTACCGGCAGCGCTACGTTGACCTGATCACGTCGCCCGAGACCCGGGAACTGTTCCGCGT CCGCACACGCATCATCCAGTACATCCGTGATTACTTCACCGGTGAGGGTTTTCTCGAGGTCGAGACCCCGATGATGCAGG CGATCCCGGGCGGTGCCACCGCGCGTCCGTTCATCACCCATCACAATGCGCTGAGTATGGATCTGTACCTGCGCATCGCG CCCGAGCTGTATCTGAAGCGGCTGGTGGTCGGTGGTTTCGAGAAGGTGTTCGAGATCAACCGCAACTTCCGCAACGAGGG ACTCTCGACCCGGCACAATCCCGAGTTCACGATGCTCGAGTTCTACGAGGCCTTCGTGACCCACCACGAACTGATGGACC GTACCGAGGCGCTGGTGCGCGGGCTCTGCACCGAAGTTCTGGGTACAACGCAGATCAGCTATCAGGGAGAAGTGCATGAT TTCGCACAGCCGTTTGTGCGCATGACGGTGCGCGAGGCGATCCTTGCATTCAACCCGGATATCCCCGCCGGCGACCTGGA TGACGAGGATCGGATGCGCATGTACTGCGAGCGCCTCGGGATCCCGCTGAAGCCCGGCTACGGTCTCGGCAAGCTCTGGA TCGAGGTGTTCGAGAAGACGGTCGAGGCCAACTTGCGGCATCCGACGTTTATCACCGCTTATCCGACCGAGGTCTCGCCG CTTGCGCGCCGCAACGACCAGGATCCTTTCGTGACCGACCGCTTCGAGTTCTTCGTCGGCGGCCGCGAGATCGCGAACGG TTTCTCGGAGCTGAACGACCCGGAGGACCAGGCCGAGCGTTTCCGCGCCCAGGTCAGCGAGAAAGAGGCGGGCGATCTCG AAGCGATGCATTACGATGCCGATTACATCCGCGCACTGGAATACGGGCTGCCGCCGACCGCGGGCGAGGGTATCGGCATC GACCGACTGGTGATGCTGCTGACCGACGCTGCGTCGATTCGCGATGTGTTGCTGTTTCCGCATCTGCGCCCCGAGACCTG A Protein sequence : MTAMDAHHDSDSGRVDENKLIAQRRDKLAALRVEGPAFPNDFRRDALAGDLHARHDSAEPAALDATALKVAVAGRMIGKR VMGKASFVTLRDLSGDIQLFVQRDALPEGVYAAFKQWDLGDVLGARGTLFKTRTGELSIQVRELRLLTKSLRPLPEKFHG LSDQETRYRQRYVDLITSPETRELFRVRTRIIQYIRDYFTGEGFLEVETPMMQAIPGGATARPFITHHNALSMDLYLRIA PELYLKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYEAFVTHHELMDRTEALVRGLCTEVLGTTQISYQGEVHD FAQPFVRMTVREAILAFNPDIPAGDLDDEDRMRMYCERLGIPLKPGYGLGKLWIEVFEKTVEANLRHPTFITAYPTEVSP LARRNDQDPFVTDRFEFFVGGREIANGFSELNDPEDQAERFRAQVSEKEAGDLEAMHYDADYIRALEYGLPPTAGEGIGI DRLVMLLTDAASIRDVLLFPHLRPET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-137 | 57 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-77 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS [H] | YP_007216588.1 | Lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 8e-138 | 57 |
