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Name : TVNIR_1050 (TVNIR_1050) Accession : YP_007216215.1 Strain : Thioalkalivibrio nitratireducens DSM 14787 Genome accession: NC_019902 Putative virulence/resistance : Unknown Product : Type I restriction-modification system, restriction subunit R Function : - COG functional category : - COG ID : - EC number : 3.1.21.3 Position : 972993 - 976190 bp Length : 3198 bp Strand : + Note : - DNA sequence : ATGATGGCGGACAGCAGGGAAGCCCGGTTTCAGCAGGACATCATCGACGCGATGACCGCCGATGGCTGGTTGACCGCTCC GGCCAGCGGCTATGACGCCGCCGATGCGCTGTACACCGAGGATCTCGTCGCCTACCTGCAGGAGGCGTGGCCGCAGCGCT GGGAGAAGTTCGCCGCCAAGAACCCGCAGGATCCGCAGAAGGCCCTGGTGCGCGCGGTCACGCGCGAGCTGGAGCGTGGC GGCACGCTGGAGGTGCTGCGCCACGGGGTGAAGACGCCGGGGGTGAAGCTGGAACTGTGCAGCTTCCGGCCCGACCACGA GATGAACCCCGAGTCCGTGGCGCGCTACCGTGCCAACCGCCTGCGGGTGGTGCCGGAGGTCTCGTACTCGCCGCATGCGC GCAGCGGCGAGTACAACCCGCGGCTGGATCTGGTGCTGTTCGTCAACGGCATCCCCACCGCCACGCTGGAGCTGAAGAGC GAGTTCAAGCAGTCGGTGGAGAACGCGAAGCGCCAGTACCGGCTCGACCGCCCGGTGAAGGATCCGGTCACCCGCAAGCT GGAACCGCTGCTGACCTTCAGGCGCGGGGCGCTGGTGCACTTTGCGGTCAGCCAGGACGAGGTGGCGATGACCACCCGCC TGAACGGCAAGGATACGGTCTTTCTGCCGTTCAACCAGGGCACCGAGGACGGCGGCGCCGGCAACCCCACACCACCGGAC CGGGACAGCTACGCGACCGGCTACCTGTGGCAGCGCGTGTTCCAGCCGGATGCCTGGCTCCGGATCACCGGCCGCTTTCT GCATTTGGAGCAGAAGACCGAGGAGGACTTCCACGGCAAGCGCCGCAAGAAGGAGGCATTGATCTTCCCGCGCTTCCACC AGTGGGACGTGGTGAACCGCCTGATCGAGGCGACGCGCGAGGAAGGCGCGGGGCAGCGCTACCTGATCCAGCACAGCGCC GGTTCCGGCAAGTCCAACTCCATCGCCTGGATCGCGCACCAGCTCGCCGCGCTGTACGACGACGCGGGCGGCAAGCTGTT CAACTCGGTGGTGGTCGTCACCGACCGCACGGTGCTGGACAGCCAGCTCCAGGACACGATCTACCAGTTCGACCACGCCC ACGGCGTGGTGCGGCCGATCACCCGCGATGTCGGCAGCCAGAGTAAGTCGGAGCAACTGGCCGGGGCGCTGGCCGAGCAG ACGCGCATCATTATCGTGACCATCCAGACCTTCCCGGCGCTGTTCGACGCGCTGGACAGGCGCCCTGACCTGGCCGCCGG GCGCTACGCGGTGATCGCCGACGAGGCGCATTCCTCGCAGACCGGCTCCTCCGCCACCAAGCTGAAAGCGATCCTCGGCA CCGACATGCCGGAGGACGAGGAGATCAGCGCCGAGGAGCTGCTTGACGCAGCCGTGGCCGCGCGCAAGCCGGCCGAGCGC ATCAGCTACTACGCCTTTACCGCCACGCCCAAGGCGAAGACGCTGGAGCTGTTCGGCCGCCCGCCGAACCCGGAGCGGCC GGCATCAAAGGACAACAAGCCCGAGCCGTTCCACCTGTACTCCATGCGTCAGGCGATCGAGGAAGGCTTCATCCTCGACG TATTGAAGAACTACACTACGTACTCGACCGCCTGGAAGCTGGCGCACCCGCACGGCGACGACCAGGAGGTCGAGTCGCGC AAGGCGTCGACCAGGATCGCCCGCTGGGTGCGCCTGCACCCGTACAACATCGCGCAAAGGGTCGAGGTGATCGTCGAGCA CTTCCGCGCCAACGTGCGCCATCTGCTGGACGGCCAGGCGAAGGCGATGGTGGTGACCGGCAGCCGCCAGGAGGCGGTGC GCTACATGCTGGCGATGCGCGAGTACATTCAGGACCGGGGCTACCCGGGCATCCACGCGCTGGTTGCCTTCTCCGGCACC GTACTGCCGGACGACGTGATCCCCGAGGAGGTGACCGAGACCAGCGCGCTGTTGAACCCGGGGCTGAAGGGCCGCGACCT GGCCGAGGCGTTCGATACCGCCGAATTCAACGTGATGATCGTCGCCAACAAGTTCCAGACCGGGTTCGACCAGCCCAGGC TCTGCGCGATGTACGTGGACAAGAAACTCCAGGGCGTCGACTGCGTGCAGACCCTCTCGCGCCTGAACCGCATCTTTCCG GGCAAGGAGAATACCTTCGTCCTCGACTTCTTCAACGACGCAGAAGACGTTCTCGCGGCCTTCCGCCCGTACTACAACAA GGCCGAGCTGGCCGATGTCTCCGACCCCAATGTCGTGTACGACCTGCAGAAGAGCCTCGACGCCGCCGGCATCTACCACT GGGACGAGGTCGAGAACTTCGCGCGCGCCTTCTTCGATCCAAAGGCCGGCGCCAGCCAACTCAGCTACTACTGCCAGCCG GCAAAGGAACGCTATACGACCCGGTACAAGGCCGTGCTGGAACGGATCCAGGCCTGGAAGGCCGCGCAGGCGCTCGCCGA GCGCAACGGCGACAAGGCCGGCCTCCACCGCGCCGAACAGGAGCTGAAGGACGCCCACACCACCCGAGACGAGCTCGACC TGTTTCGGAAGAACCTGCAGAGCTTCGTGCGCAGCTACGAGTTCCTGTCACAGATCGTCGACTTCGACGACCGCGAGCTG GAACAGCTCTGCGTGTACGCCCGTGCGCTGCACCCGCTGCTGCGCATCGAGAACCTGGAAGAAGACCCGATCGACGTCGA CGAACTCGAGCTGACCCACTACCGGCTGAACAAGCGCGCCGAACATCGTCTGAATCTGGCGGAGGAGGGCGGAGACTACA GCGGGCTGAAGCCCGTCACCGACGTCGGTTCCGGCAAGCCCCACGACCCGGAAAAGAAACGCCTTTCCGAGATCATCGAC CAGCTCAACGAACTGTTCGGCGCCGAAGTCAGCGACGCAGACAAGCTCCAGTTCGCCAACGGCATCGCCGACCGCATCCG CCGCGACGACGCCGTGATGGCCCAGGTCGAGAACCACAGCCCGGACCAGGTGATGCATGGCCTGTTCCCGAAACGCGTTA CCGACACCGTGCTCGACGCGATGACCGACCACGAAAAACTCTCGATGCAGGTGCTGGACAGTCCCGAACATCAGCGCGAC TTCGCGCTACTGATCCTGCGCCTGCTGACCGCCGGGGCCGGCGAGCAACGCAACCCCGCCACGAGGACCGGCCCCTGA Protein sequence : MMADSREARFQQDIIDAMTADGWLTAPASGYDAADALYTEDLVAYLQEAWPQRWEKFAAKNPQDPQKALVRAVTRELERG GTLEVLRHGVKTPGVKLELCSFRPDHEMNPESVARYRANRLRVVPEVSYSPHARSGEYNPRLDLVLFVNGIPTATLELKS EFKQSVENAKRQYRLDRPVKDPVTRKLEPLLTFRRGALVHFAVSQDEVAMTTRLNGKDTVFLPFNQGTEDGGAGNPTPPD RDSYATGYLWQRVFQPDAWLRITGRFLHLEQKTEEDFHGKRRKKEALIFPRFHQWDVVNRLIEATREEGAGQRYLIQHSA GSGKSNSIAWIAHQLAALYDDAGGKLFNSVVVVTDRTVLDSQLQDTIYQFDHAHGVVRPITRDVGSQSKSEQLAGALAEQ TRIIIVTIQTFPALFDALDRRPDLAAGRYAVIADEAHSSQTGSSATKLKAILGTDMPEDEEISAEELLDAAVAARKPAER ISYYAFTATPKAKTLELFGRPPNPERPASKDNKPEPFHLYSMRQAIEEGFILDVLKNYTTYSTAWKLAHPHGDDQEVESR KASTRIARWVRLHPYNIAQRVEVIVEHFRANVRHLLDGQAKAMVVTGSRQEAVRYMLAMREYIQDRGYPGIHALVAFSGT VLPDDVIPEEVTETSALLNPGLKGRDLAEAFDTAEFNVMIVANKFQTGFDQPRLCAMYVDKKLQGVDCVQTLSRLNRIFP GKENTFVLDFFNDAEDVLAAFRPYYNKAELADVSDPNVVYDLQKSLDAAGIYHWDEVENFARAFFDPKAGASQLSYYCQP AKERYTTRYKAVLERIQAWKAAQALAERNGDKAGLHRAEQELKDAHTTRDELDLFRKNLQSFVRSYEFLSQIVDFDDREL EQLCVYARALHPLLRIENLEEDPIDVDELELTHYRLNKRAEHRLNLAEEGGDYSGLKPVTDVGSGKPHDPEKKRLSEIID QLNELFGAEVSDADKLQFANGIADRIRRDDAVMAQVENHSPDQVMHGLFPKRVTDTVLDAMTDHEKLSMQVLDSPEHQRD FALLILRLLTAGAGEQRNPATRTGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0025 | YP_042158.1 | type I restriction enzyme protein | Not tested | SCC476 | Protein | 1e-144 | 41 |
