Gene Information

Name : Theco_0387 (Theco_0387)
Accession : YP_007211608.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 391230 - 393224 bp
Length : 1995 bp
Strand : -
Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast

DNA sequence :
ATGTCTGCCAAACCAACCATTGACCAACTTGCCATCAACACCATCCGCACGCTGTCCATCGATGCGATCAACGCCGCCAA
CTCCGGCCATCCCGGCCTGCCGATGGGCGCCGCGCCGATGGCGTACGCGCTCTGGAGCGAGCATATGAACCACAATCCGG
CGAACAGCAAATGGTTCAACCGCGACCGCTTCGTCCTGTCGGCCGGCCACGGCTCGATGCTGCTGTACAGCCTGCTGCAT
CTGTTCGGCTACAACGTGACGCTCGACGACCTGAAGCAATTCCGCCAGCTCGGCAGCAAGACGCCCGGCCATCCCGAGTT
CGGGCACACCGACGGCGTCGAAGCGACGACGGGTCCGCTCGGCCAGGGGATCGCGATGGCGGTCGGCATGGCGATGGCCG
AAGCGCATCTGGCCGCGAAGTTCAACCGGGAAGGCTTCCCGGTCGTCGACCACTACACGTACGCGCTCGTCGGCGACGGC
TGCCTGCAGGAGGGCATCTCCTACGAGGCGATGTCGATGGCCGGCCACATGAAGCTCGGCAAGCTGATCGTGCTGTACGA
CTCGAACGACATCTCGCTGGACGGCGAGCTCAAGCTCAGCTTCAGCGAGAACGTCCGGCTGCGGGCCGAATCCGCGAACT
GGCAATACTTGCGTGTGGAGGACGGCAACGATCCGGCCGCGGTATCGGCTGCCATCGCGGAAGCGAAGGCGAATCTTGAT
CAGCCGACGATCATCGAGGTGCGCACGATCATCGGCTACGGCAGCAAGAACGCCGGCACGAACAAGGTGCACGGCGCCCC
GATCGGCGAAGAGGACGCGAAGAACGCCAAGGCGGCATACGGCTGGACGTGGGAAGAACCGTTCACGGTGCCGGATGAAG
TGCGGAAGCATTTTGCGGAGCTGAAGGCGAAGGGCGCCGCGAAGGAAGCAGAGTGGAACAAGCTCTTCGAAGCTTACAAG
GCGCAGCATCCGGAACTCGGCCGGGAGCTGGAGCAGGCGATCGACGGCACGGTGAAGATCGACGCCGCCGACATCCTGAC
GTTCGATCCCGCGAAGGCGATCTCGACCCGCGTCGCGAGCGGCGAAGCGATCAACCACTACGTGAAGATCGTGCCGTCCA
TCTTCGGCGGCAGCGCCGACCTGTCGCACTCGACGATGACGGACATCAAGGGCGAGAGCAAGTTCGCCGTCGAATCGTAC
GCCGGCCGCAACGTCTACTTCGGCGTCCGCGAGCACGCGATGGGCGCGGCCGGGAACGGCATGGCGCTGCACGGCGGCAT
CCGCCCGTTCGTCAGCACGTTCTTCGTGTTCAGCGACTACCTGCGCCCGTCGATCCGCCTGGCCGCGCTGCAGAAGCTGC
CGGTCGTGTACGTGTTCACCCACGACTCGATCGCCGTCGGCGAAGACGGGCCGACGCACGAGCCGATCGAGCAGCTCGCC
GCGCTGCGCTCCATCCCCGGCGTGACGGTCATCCGCCCGTCCGACGCGAACGAGACGGCCAGCGCCTGGGCGTACGCGCT
CGAGCAGCAGGACGGCCCGGTGGCGCTCGTGCTGAGCCGGCAAAACCTGCCGGTGCTCGAAGCGACGGCGCGCAACAAAG
CTGAAGTCGCGCGGGGCGGCTATGTGCTCGCCGATGCGAACGGTCAGCCGGATGCCATCCTGATCGCAACCGGCTCGGAA
GTGTCGCTGGCGCTCGGCGCCAAGGCGGAGCTCGAGAAAGAAGGCGTCAAGTTGCGCGTCGTGGCGATGCCGAGCCGCGA
ACTGTTCGACCGCCAGCCGGAAGACTACAAAAAGTCCGTCCTGCCGGACGGCGTGGCGAAGCGGCTCGTGATCGAAGCCG
GCATTTCGCTCGGCTGGGACCGCTACGCGGGGCCGGGCGGCAAGGTGCTGTCGATCGAGACCTTCGGCGCTTCGGGCCCG
GGCGGCGCGGTGCTGAAGCATTTCGGCTTCTCCGTCGACAACGTCGTCCGCCTCGTCCGCGAGATGCTGCAATAA

Protein sequence :
MSAKPTIDQLAINTIRTLSIDAINAANSGHPGLPMGAAPMAYALWSEHMNHNPANSKWFNRDRFVLSAGHGSMLLYSLLH
LFGYNVTLDDLKQFRQLGSKTPGHPEFGHTDGVEATTGPLGQGIAMAVGMAMAEAHLAAKFNREGFPVVDHYTYALVGDG
CLQEGISYEAMSMAGHMKLGKLIVLYDSNDISLDGELKLSFSENVRLRAESANWQYLRVEDGNDPAAVSAAIAEAKANLD
QPTIIEVRTIIGYGSKNAGTNKVHGAPIGEEDAKNAKAAYGWTWEEPFTVPDEVRKHFAELKAKGAAKEAEWNKLFEAYK
AQHPELGRELEQAIDGTVKIDAADILTFDPAKAISTRVASGEAINHYVKIVPSIFGGSADLSHSTMTDIKGESKFAVESY
AGRNVYFGVREHAMGAAGNGMALHGGIRPFVSTFFVFSDYLRPSIRLAALQKLPVVYVFTHDSIAVGEDGPTHEPIEQLA
ALRSIPGVTVIRPSDANETASAWAYALEQQDGPVALVLSRQNLPVLEATARNKAEVARGGYVLADANGQPDAILIATGSE
VSLALGAKAELEKEGVKLRVVAMPSRELFDRQPEDYKKSVLPDGVAKRLVIEAGISLGWDRYAGPGGKVLSIETFGASGP
GGAVLKHFGFSVDNVVRLVREMLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-142 48
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 5e-144 47