Gene Information

Name : Theco_3814 (Theco_3814)
Accession : YP_007214823.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4035096 - 4036109 bp
Length : 1014 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
ATGGATTCGTGTAAAATGGAAGTCGCCAAACACCCATTCGTACAGGAGGATCCATTCATGAGCTACTCCCATCTTAGCAT
AATTGAGCGCGGACAAATAGAGGCTTTGCATCGACTCGGCTGGTCAACGAGGAAGATCGGCAAACAGCTTGGACGCCATC
ACTCCACGATCGCCCGTGAACTCTGTAGAGGGCAAGTCAATGCGTCCTATGAAGCCGCGCCCGCACAAGACGCCTATCAA
GAGCGAAGAGCTGCTTGTGTGCCATCTGGCAAGTTCACATCCGAGCTGGCTGCGGAACTGCAAGAGAAGCTGGAGCAGAC
CTGGTCGCCCGAGCAGATCGCAGAGAGGCGGCGATGTGAAGGACAAGCATTCGTATGCTTCAAGACGATCTACCGCTGGC
TATATGCTGGCAAGCTGACCGTCTCTGAGACTCAGGTGCTTCGCCACAAGGGCAAGCGACGCAAACCCGTGGAGACACGC
GGACGCTTCCTCGTCGGCACCCCCATCCGTCAGCGCCCGAAAGAAGTACGCAAGCGTTCCACTTTCGGTCATTGGGAACT
GGATACCATTGTGTCAAGCCGAGGGAAGAGCAAGGCTTGTGCCGCGACGTTCATCGAACGTAAAACCCGGCTCTATCTTG
CGGTGAAAATGCCGGATCGCACAGCCCATTCCATGGAGATCGCATTTGGCGTAGCGGCAAGCCAGTATCCGAAAGGGACC
TTCAAGACGGCAACAACCGATCGCGGCAAAGAATTTGCTTGTTATACCGCACTCGAAAATACGCATAACATCAAGGTCTA
CTTCGCAGATCCCTACTCATCATGGCAACGTGGTTCCAATGAGAACGCCAACGGCCTCCTGCGGGAGTTCTTTCCCAAAG
GACATGATTTCGCCGCTGTGTCAGACGATGAACTTGCGAGGGCTATACACCTCATCAACAACCGCCCTCGAAAATGCCTG
AACTGGAAATCTGCTTACGAAGCATTCATGGATGAGCTGTCGCATTTAGCTTGA

Protein sequence :
MDSCKMEVAKHPFVQEDPFMSYSHLSIIERGQIEALHRLGWSTRKIGKQLGRHHSTIARELCRGQVNASYEAAPAQDAYQ
ERRAACVPSGKFTSELAAELQEKLEQTWSPEQIAERRRCEGQAFVCFKTIYRWLYAGKLTVSETQVLRHKGKRRKPVETR
GRFLVGTPIRQRPKEVRKRSTFGHWELDTIVSSRGKSKACAATFIERKTRLYLAVKMPDRTAHSMEIAFGVAASQYPKGT
FKTATTDRGKEFACYTALENTHNIKVYFADPYSSWQRGSNENANGLLREFFPKGHDFAAVSDDELARAIHLINNRPRKCL
NWKSAYEAFMDELSHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 1e-79 56
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 9e-80 56