Gene Information

Name : Theco_3657 (Theco_3657)
Accession : YP_007214676.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3886816 - 3888348 bp
Length : 1533 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
TTGGATCATCAGCAGCAAGGCGGCAGTGTGGAAACGGCCGGACAGGAGCAGGAACTGAGCGAGCTGCTCCGCATCCGGCG
AAGCAAGTTGGACGAGCTCCGGAAACTCGGGCTGGACCCGTTCGGCCGGAAGTACGAGCGGACGCATCAGGCGCAGGAGA
TTCTGGACGCGTACGATGCGCTGGAGACGGAGGAGCTTGAGGCGAAGCAGGTATCCGTCAGCATCGCCGGACGGATCATG
CAGAAGCGGTCCATGGGGAAGGCGTCGTTCGCCCACATCCAGGACCTGTCGGGCAGGATCCAGATCTACGTCCGTCAGGA
CGCGGTCGGCGAGACGGCGTACAAGGCGTTCTCGATGCTCGACATCGGCGACATCATCGGGGTGAAGGGCACCGTCTTCA
AGACGAAGACCGGCGAGACTTCCGTCAAGGTCCAGGAGCTGGAGGTGCTGACGAAGTCGCTGCTGCCGCTTCCGGACAAG
TATCACGGGCTGAAAGACGTCGAGCTGCGCTACCGGCAGCGCTACGTCGATCTGATCGTCAATCCGGACGTGAAGCAGAC
GTTCATCACCCGTTCCCGCATCATCCAATCGATGCGGCGCTATCTGGACAGCCACGGCTATCTCGAAGTCGAGACGCCGA
CGCTGCACGCGATCGCCGGGGGCGCGGCGGCGCGGCCGTTCATCACGCATCACAACGCGCTGGACATGCAGCTCTACATG
CGGATCGCGATCGAGCTGCATCTGAAGCGGCTGATCGTCGGCGGTCTGGAGAAGGTGTACGAGATCGGCCGGGTGTACCG
GAACGAGGGCGTGTCGACGCGTCACAATCCGGAGTTCACGATGCTGGAGCTGTACGAGGCCTACGCCGACTACCGCGACA
TCATGACGCTGACCGAGAACCTGATCGCGCATATCGCGCAGGACGTGCTCGGCACGACGAAGATCACGTACCAGGGGATG
GAGATCGACCTGGCCCCGCCGTGGCGCCGGGTTTCGATGGTCGAGCTCGTCAAGGAAGCGACGGGCATCGACTTCACGAA
GCAGATGAGCGACGAAGAGGCGCATGAACTGGCGAAGGCGCACGGCGTGCCGGTCGAGCCGCACATGCAGTTCGGCCATA
TCGTCAACGCGTTCTTCGAAAAGTTCTGCGAGCACACGCTTATCCAGCCGACGTTCGTCACGGGCCATCCGGTGGCGATC
TCGCCGCTGGCGAAGAAGAATGACGAAGATCCGCGCTTTACGGACCGGTTCGAACTGTTCATCGTCGCGCGGGAGCATGC
GAACGCGTTCACCGAGCTGAACGATCCGATCGACCAGCGCGAACGGTTCGAGGCGCAGCTTGCCGAACGCGAGCAAGGCA
ACGACGAGGCGCATGAAATGGACGAGGATTTCCTGCGCGCGCTGGAATACGGCATGCCGCCGACCGGCGGGCTCGGCATC
GGCATCGACCGTCTGGTCATGCTGCTGACGGATGCGCCGTCGATCCGGGATGTGCTGCTGTTCCCGCATATGCGGGATCG
CGCCGGCGAATAA

Protein sequence :
MDHQQQGGSVETAGQEQELSELLRIRRSKLDELRKLGLDPFGRKYERTHQAQEILDAYDALETEELEAKQVSVSIAGRIM
QKRSMGKASFAHIQDLSGRIQIYVRQDAVGETAYKAFSMLDIGDIIGVKGTVFKTKTGETSVKVQELEVLTKSLLPLPDK
YHGLKDVELRYRQRYVDLIVNPDVKQTFITRSRIIQSMRRYLDSHGYLEVETPTLHAIAGGAAARPFITHHNALDMQLYM
RIAIELHLKRLIVGGLEKVYEIGRVYRNEGVSTRHNPEFTMLELYEAYADYRDIMTLTENLIAHIAQDVLGTTKITYQGM
EIDLAPPWRRVSMVELVKEATGIDFTKQMSDEEAHELAKAHGVPVEPHMQFGHIVNAFFEKFCEHTLIQPTFVTGHPVAI
SPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQRERFEAQLAEREQGNDEAHEMDEDFLRALEYGMPPTGGLGI
GIDRLVMLLTDAPSIRDVLLFPHMRDRAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 8e-125 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_3657 YP_007214676.1 lysyl-tRNA synthetase VFG1668 Protein 4e-125 52