Gene Information

Name : Theco_3217 (Theco_3217)
Accession : YP_007214270.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3388753 - 3389709 bp
Length : 957 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGAGCTACTCCCATCTTAGCATAATTGAGCGCGGACAAATAGAGGCTTTGCATCGACTCGGCTGGTCGACGAGGAAGAT
CGGCAAACAGCTTGGACGCCACCACTCCACGATCGCCCGTGAACTTGGCAGAGGGCAAGTGAATGCGTGCTATGAAGCCG
CGTCCGCACAAGACGCCTATCAAGAGCGACGAGCTTCATGTGTACCCGCTGGCAAGTTCACACCCGAGCTGGCTGCGGAA
CTGCAAGAGAAGCTGGAGCAGACCTGGTCACCCGAGCAGATCGCAGAGAGGCGACGATGTGAAGGACAGGCGTTCGTATG
CTTCAAGACGATCTACCGCTGGCTATATGATGGCAAGCTGACCGTATGTGAAAACAAGGTGCTTCGTCACAAGGGAAAGC
GACGCAAACCCATCGAGACACGAGGGCGTTTCACCGTCGGCACCCCTATCCGTCAGCGCCCGAAAGAAGTACGCAAGTGT
TCAACTTTCGGCCATTGGGAACTGGACACCATCGTTTCGAGCCGAGGGAAGAGCAAGGCGTGTGTGGCGACTTTTATCGA
ACGCAAAACCCGGCTCTACTTTGCGGTGAAAATGCCGGACCGCACAGCTCATTCCATGGAGATCGCCTTTGGCGTGGCGG
CAAGCCAGTATCCGAAAGGGACCTTCAAGACGGCAACAACCGATCGCGGCAAAGAATTTGCTTGTTATACCGAACTTGAA
CATACGCATGCCATCAAGGTCTACTTCGCAGATCCCTGCTCATCATGGCAACGTGGTTCCAATGAGAATGCCAATGGCCT
GTTGCGAGAGTTCTTTCCTAAAGGACACGATTTCGCCATTGTTACAGACGAGGAGCTTGCGAGGGCTGTTCGCCTCATCA
ACAACCGCCCTCGAAAATGCCTGAACTGGAAATCTGCTTACGAAGCATTCATGGATGAACTGTCGCATTTAGCTTGA

Protein sequence :
MSYSHLSIIERGQIEALHRLGWSTRKIGKQLGRHHSTIARELGRGQVNACYEAASAQDAYQERRASCVPAGKFTPELAAE
LQEKLEQTWSPEQIAERRRCEGQAFVCFKTIYRWLYDGKLTVCENKVLRHKGKRRKPIETRGRFTVGTPIRQRPKEVRKC
STFGHWELDTIVSSRGKSKACVATFIERKTRLYFAVKMPDRTAHSMEIAFGVAASQYPKGTFKTATTDRGKEFACYTELE
HTHAIKVYFADPCSSWQRGSNENANGLLREFFPKGHDFAIVTDEELARAVRLINNRPRKCLNWKSAYEAFMDELSHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 1e-77 55
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 7e-78 55