Gene Information

Name : Theco_3123 (Theco_3123)
Accession : YP_007214177.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3271116 - 3271922 bp
Length : 807 bp
Strand : -
Note : PFAM: Integrase core domain

DNA sequence :
TTGAATGGTGTATCCCGGAGCGGTTATTATCAATGGACCCGGCGCAAGGAAAGTGAACGGAAAAAACGCCGCGAACGGTT
AAAACAGCAAATTAGCCGCATCTTCCTGGAATCGCGCCGTCTGTATGGCAGTCCGAAGATCGCTCAAGTCTTGCGCCAGC
AAGGGATGCGGGTGTCCGAGAAAACCGTCGCCCGCATCATGCAGGAGTTGGGGCTTAAGTCGCGCACCGTCCGAAAATAC
AAGGCGACGACGAACTCGAGGCACAACCTGCCAGTGCATGACAATGTGCTGAATCAGCAGTTCACAGCGCAAGCTCCCAA
CCAAGTCTGGATGGCGGACATCACGTACGTTCCGACAGACGAAGGATGGCTCTATGTCGCGAGCGTCATGGACTTGTACA
CGCGCAAAATCGTAGGCTGGCACGCTGATGAGCGGATGACCAAGGAACTGGTCTTGCAAGCTCTGGACCAGGCTTACAGC
CGTCAGCGGCCCAAAGGTAAGGTTCTTCATCATTCCGATCGGGGCAGCCAATACGCTTCCCATGAGTACCAACAACGGCT
CCTAAAATACGGGATGAAGGGCAGCATGAGCCGCAAGGGCAACTGCTACGACAACGCCTGCATCGAATCGTTCCACAGCA
TACTCAAAAAGGAACTCGTTTATCTGGAAAAGTTCAAGACCCACAAGGAAGCGCAAAGCAAGATTTTTGAATATATCGAG
TTTTTCTACAATCGCAAACGAGTCCATTCGGCGATCGGGTATCTCACACCCATTCAATGCGAACAAATGTACGATTATGT
TGCGTAA

Protein sequence :
MNGVSRSGYYQWTRRKESERKKRRERLKQQISRIFLESRRLYGSPKIAQVLRQQGMRVSEKTVARIMQELGLKSRTVRKY
KATTNSRHNLPVHDNVLNQQFTAQAPNQVWMADITYVPTDEGWLYVASVMDLYTRKIVGWHADERMTKELVLQALDQAYS
RQRPKGKVLHHSDRGSQYASHEYQQRLLKYGMKGSMSRKGNCYDNACIESFHSILKKELVYLEKFKTHKEAQSKIFEYIE
FFYNRKRVHSAIGYLTPIQCEQMYDYVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-52 51
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-52 51
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-52 50
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-52 50
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-52 50
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-52 50
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-52 50
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-52 50
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 4e-50 49
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-46 44
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 4e-46 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 4e-46 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-45 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-45 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 7e-46 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 6e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_3123 YP_007214177.1 transposase VFG1706 Protein 3e-52 50
Theco_3123 YP_007214177.1 transposase VFG1631 Protein 6e-46 43