Gene Information

Name : Theco_2984 (Theco_2984)
Accession : YP_007214043.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : Mn/Zn ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3122136 - 3122873 bp
Length : 738 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGAACCGGTGCTGCAAGTGAGAGGGCTCCATGCCGCATACCGCAGGACCAAGGTGCTGGATCATGTGACATTCGACGT
GATGCCCGGCACGCTGACGGCGATCATCGGGCCGAACGGCGCCGGCAAATCGACGCTGCTGAAGACGATGCTCGACCTGC
ATCCCCGGCTGGGCGGCGAGGTCCGCTTCTTCGGCACGGCCTACCGGAACGCGAAACTCAAAGTCGGGTATGTGCCGCAG
CGGGGCTCGGTGGACTGGGACTTCCCGACCGACGCGCTCGATGTCGTACTGATGGGGCTGTACGGGCGGATCGGCTGGTT
CAGGCGGCCGGGACGCCGGCACCGGGAGCTGGCGCTTGAGGCGCTGGACAAGATGGGCATGGCCGACTTCGCGAAGCGCC
AGATCAGCGAGCTGTCCGGCGGCCAGCAGCAGCGGGTTTTCCTCGCCCGCGCGCTCGTGCAGGACGCCGATCTTTACCTC
CTTGACGAGCCGCTGGCGGGCGTGGACGCCGCGACGGAACGGGCGATCATGGAGATGCTGAGAACGCTGCGCGCCGCCGG
CAAGACAGTGATGGTCGTCCACCACGATCTGCAGACGGTGGAAGACTATTTCGATCACGTGCTGATGTTGAATCGGACCG
TCATCGCCCACGGCCCGACCACGGAGATCTTCACGCAGGACACGATCGCCCGCACGTACGGCGGCTGGCTGAGGCGGAAG
GAGCGGGTGACGGGATGA

Protein sequence : 
MEPVLQVRGLHAAYRRTKVLDHVTFDVMPGTLTAIIGPNGAGKSTLLKTMLDLHPRLGGEVRFFGTAYRNAKLKVGYVPQ
RGSVDWDFPTDALDVVLMGLYGRIGWFRRPGRRHRELALEALDKMGMADFAKRQISELSGGQQQRVFLARALVQDADLYL
LDEPLAGVDAATERAIMEMLRTLRAAGKTVMVVHHDLQTVEDYFDHVLMLNRTVIAHGPTTEIFTQDTIARTYGGWLRRK
ERVTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33755.1 putative ABC transporter ATP-binding protein Virulence PAI I 536 Protein 7e-33 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 5e-48 42
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-48 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-45 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-44 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-44 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-44 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2984 YP_007214043.1 Mn/Zn ABC transporter ATPase BAC0400 Protein 8e-65 59
Theco_2984 YP_007214043.1 Mn/Zn ABC transporter ATPase BAC0350 Protein 2e-45 41
Theco_2984 YP_007214043.1 Mn/Zn ABC transporter ATPase BAC0440 Protein 4e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2984 YP_007214043.1 Mn/Zn ABC transporter ATPase VFG1496 Protein 4e-33 43
Theco_2984 YP_007214043.1 Mn/Zn ABC transporter ATPase VFG0526 Protein 2e-45 41