Gene Information

Name : Theco_2813 (Theco_2813)
Accession : YP_007213897.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Resistance
Product : multidrug ABC transporter ATPase/permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2933935 - 2935767 bp
Length : 1833 bp
Strand : -
Note : PFAM: ABC transporter transmembrane region; ABC transporter

DNA sequence : 
ATGACCGGGAAGAAAGGGTTCGCGCGGCTGCTCGAAATCGCCGGCGAGAAGCGCGGACTGCTGATCGCCTCCGGCCTGTT
CTCCGCGGTCAGCGCCGTCTGCATGCTGATGCCGTACGTGTCCGTCTATTTCATCCTGCGGGAGCTGCTGGAACACGCGG
CGTCCCCGGCGCTGGCCGACGGAGCGAAGATGAGCCGCTGGGGCGTCATCGCCATCGCCGGCTTCACGGCCGGCCTGGCC
GCGACGTACGCGGGAGGCCTGATTGCGCACATCGCCGCGTTCCGCATTCTGTACGGCCTCCGGATCAGGCTCGCCGGCCA
TATCGGCAAGCTGCCGCTCGGATGGTTGAGCAGCCGCTCGACGGGGGCCGTCAAGAAGACGCTGGAAGACAACGTGGACA
GGGTTGAACTGTTCATCGCGCACCAACTGCCCGATCTCGTTCACGCGGCGGTGACGTTGATGGTGATGATCGCCGTCATG
TTCTCGTTCAACGTCTGGCTGGCGATCGCGTGCATCCTGCCGATGGTGATCGGCGTCGCGGCGCAGTTTCTGGCTTTTGC
CAGTCCGAAGACGCGGAATACCCTCAAGTCGGCTCTGGATGCGCTGGAGCGGATGAACGCTTCCGCCGTGCAGTATGTGC
GGGGCATGCCGGCCGTCAAGGTGTTCGGGCAGACGGTGCATTCGTTCCGGCAATTTTACCAGGACATGGTGCGCTACCGC
GACCACGGTGTCATGCTGACGCAACTGTTTCAGAACGGGAACCTGACCTTCAAGGTCATCCTGAATTCGCTTGCCGCGTT
CATCCTGCCGGTCGGCGTGTTCCTGCTGAACCGCGATCCGGGGAGCATTACCGCCGCTTCCACGGTGCTGTTCTTCCTGG
TCATGGCGCCGGGCATCGCCGCCCCGATGTTCAAGCTCATGTACCTGATGGAGAATACCCGGCTGATCAACGAAGGCGTG
GAGCGGTTCGACCGCATCCTGGCGGAGCCGCCGCTGCCGGAACCCGAGATTCCGCGGCGGCCGGCGTCCTTCGACGTGAC
GTTCGATCATGTTTTCTTCTCGTACGGAACGGAACCGACCGATACGGACGCGCTGGCGGATATTTCGTTCACCGCCCGGC
AAGGGGAAGTGACGGCCCTCGTCGGGCCGTCGGGGGCGGGCAAGTCGACCGTCGCCCATCTGGTGCCCCGCTTCTGGAAC
GTGAACATGGGGGCGGTCCGCATCGGCGGCGTGGACATCCGCGACATGACGACCGCCGATCTGATGGATACCGTCGCCTT
CGTGTTCCAGGACTCGTTCCTGTTCTCCGACACCGTGTACAACAATATCGCGGTCGGCCGGCCGGACGCGGCGCCCGAAG
AGGTGTACGCCGCGGCGCAGGCCGCGCAGTGCCACGCGTTCATCGAGAAGCTGCCGCAAGGATACGGCACACGGATCGGG
GAAGGCGGCGTCCATCTGTCCGGCGGCGAGGCGCAGCGGATCAACGTGGCCAGGGCGATTCTGAAGAACGCCCCGATCCT
CGTCCTGGACGAAGCGACCGCCTTCGCCGACCCGGAGAACGAGCACGAGATGCAGCTCGCGCTCAAGGCGCTGATGAAGG
ACAAGACGGTGCTCGTCATCGCGCACCGCCTGTCGACCATCCGGGACGCGGACCAGATTCTCGTGATGGAGGACGGCAGA
ATCGTCGAGCGGGGCAAACATGAAGCGCTGCTCGCGTCCGGGGGCTTGTACACGCGCATGTGGCAATCCTATCGGCAGGC
CGCACAATGGCATTTGGGCAAGGGGGAGGTGGACGCCGATGCGCCGCATGCTTCGCAACATTACGGTGGATAA

Protein sequence : 
MTGKKGFARLLEIAGEKRGLLIASGLFSAVSAVCMLMPYVSVYFILRELLEHAASPALADGAKMSRWGVIAIAGFTAGLA
ATYAGGLIAHIAAFRILYGLRIRLAGHIGKLPLGWLSSRSTGAVKKTLEDNVDRVELFIAHQLPDLVHAAVTLMVMIAVM
FSFNVWLAIACILPMVIGVAAQFLAFASPKTRNTLKSALDALERMNASAVQYVRGMPAVKVFGQTVHSFRQFYQDMVRYR
DHGVMLTQLFQNGNLTFKVILNSLAAFILPVGVFLLNRDPGSITAASTVLFFLVMAPGIAAPMFKLMYLMENTRLINEGV
ERFDRILAEPPLPEPEIPRRPASFDVTFDHVFFSYGTEPTDTDALADISFTARQGEVTALVGPSGAGKSTVAHLVPRFWN
VNMGAVRIGGVDIRDMTTADLMDTVAFVFQDSFLFSDTVYNNIAVGRPDAAPEEVYAAAQAAQCHAFIEKLPQGYGTRIG
EGGVHLSGGEAQRINVARAILKNAPILVLDEATAFADPENEHEMQLALKALMKDKTVLVIAHRLSTIRDADQILVMEDGR
IVERGKHEALLASGGLYTRMWQSYRQAAQWHLGKGEVDADAPHASQHYGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1698 YP_003446800.1 multidrug ABC transporter ATPase/permease Not tested The aminoglycoside resistance gene cluster Protein 6e-107 42
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 7e-68 41
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 7e-68 41
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 6e-68 41
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 6e-68 41
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 6e-68 41
ybtP CAA21388.1 - Virulence HPI Protein 6e-68 41
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 9e-68 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2813 YP_007213897.1 multidrug ABC transporter ATPase/permease BAC0432 Protein 3e-68 41