Gene Information

Name : Theco_0278 (Theco_0278)
Accession : YP_007211520.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : cobalamin/Fe3+-siderophore ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 308261 - 309145 bp
Length : 885 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
TTGGACAGACTGATAACGCAAGACCTGGCGATTGGCTATGACGAACGGCTGATTGTGGACGGTCTGAACCTGAGCATACC
GACGGGCAAGATTACCGCCCTGGTAGGTTCGAACGGGTCGGGCAAATCGACGATTTTGAAGACGATGGCCCGCATCATGA
AACCCCAGCGCGGCAGCGTGCTGCTCGACGGGAAGGCGATCCACTCGCAATCGACGCGGGAAGTGGCGAAACAGCTGGCG
ATTCTGCCCCAGAATCCCGTTGCGCCCGAAGGGCTTACGGTCCGCGAACTGGTCGGCTACGGCCGCTATCCGCATCAGAA
AGGCTTCGGCACGATGAGCCGGGAAGACCGTGAGATCGTGGAGTGGGCGATCGAGATGACCGGTCTTGTTTCATTTGCCG
ACCGTGCGGTTGATCAGTTGTCCGGCGGTCAGCGGCAGCGGGCATGGATTGCGATGGCGCTCGCGCAGCAGACGGAAATA
TTGTTCCTGGACGAGCCGACGACCTATCTCGATATGGCGCATCAGCTCGAGGTGCTGAAGCTGCTGCAGCAGCTCAATGA
AGAGCAAGGCCGAACGATCGTCATGGTCGTGCACGATCTGAACCACGCCACGCGTTATGCGCATCACATGGTCGCGATCA
AGTCCGGCAAGATCGTGGCCGAAGGCGAACCGGCGAAAGTGACGACGAAGGAAGTGCTCCGCGAAGTATTCGGGATCGAA
GCCGATATTCTGTTCGATCCGCGCACCGGCGTGCCGCTCTGTCTGCCGTTCGAGCTGTTCCGCGAAAGCCTGCGTACGGC
GAAGAACCGCGAGCATCAGCAGGTGAAGAGCGAACAGGAAGATCGGGCTTACGGCAAGCAGGCGAATGCCGTGACGAACG
GTTGA

Protein sequence : 
MDRLITQDLAIGYDERLIVDGLNLSIPTGKITALVGSNGSGKSTILKTMARIMKPQRGSVLLDGKAIHSQSTREVAKQLA
ILPQNPVAPEGLTVRELVGYGRYPHQKGFGTMSREDREIVEWAIEMTGLVSFADRAVDQLSGGQRQRAWIAMALAQQTEI
LFLDEPTTYLDMAHQLEVLKLLQQLNEEQGRTIVMVVHDLNHATRYAHHMVAIKSGKIVAEGEPAKVTTKEVLREVFGIE
ADILFDPRTGVPLCLPFELFRESLRTAKNREHQQVKSEQEDRAYGKQANAVTNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-60 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-60 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-55 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-58 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-56 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-58 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-49 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-49 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 44
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_0278 YP_007211520.1 cobalamin/Fe3+-siderophore ABC transporter ATPase BAC0164 Protein 9e-56 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_0278 YP_007211520.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG0925 Protein 4e-58 48
Theco_0278 YP_007211520.1 cobalamin/Fe3+-siderophore ABC transporter ATPase VFG1042 Protein 8e-56 47