Gene Information

Name : Theco_2278 (Theco_2278)
Accession : YP_007213389.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2361484 - 2362371 bp
Length : 888 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATCAGTTGCGAGAATCTGGTGAAGATTTACAAGACGGCCGATATTGAAGTCGTGGCGCTCCAGGGGCTCAATCTGCA
GGTCGAACAGGGCGAGATGATGGCAATCATCGGCAACTCCGGCAGCGGCAAGTCGACGCTGCTGAACATGCTGGGCGGAC
TGGATCGCCCGTCTGCGGGAAAGCTGCATGTCGACGGCAAGGACATGCTGAAGCTGACGGACAAGGAGCTGACCCGCTAC
AAGCGGGAGACGGTCGGTTTCATCTGGCAGAACAAGGCGCGCAACCTGATTCCCTATCTGACGGCGCGGGAAAACGTCGA
AATCCCGATGTTGCTGCACGACCGGAAGCAGAAGCGGATGCGCGCGATGGAACTGCTTGATGCGGTGGGACTCGGCCATC
GGGCGAACAACCGCCTGGAGCAGCTGTCGGGAGGCGAGCAGCAGCGGGTCGCGATCGCCATCGCCCTGGCCAACCGGCCA
AAACTGCTGCTGGCGGACGAACCGACGGGCGCGCTCGATACCCGGACGTCCGCGCAGATCATGGGACTGCTGTGCAAGCT
GAACGCCGAGCTCGGGCTGACGATCGTCATCGTCACCCATGACCTCAGCCTGGCGAAGCAGGTGAAACGGGTGGTTGCGA
TTCGCGACGGGCGGACGTCATCCGAGATGATCCTCCGGCAGAGCGGGGACGCCGGAGCGGGCGTCGGGGCGGACGACGCC
TTCGACACCCATATTGAATACGCCGTCATGGACCGTTCGGGCCGCATCCAGGTCCCCGAGCATTACCTGGAAGCGGTCGG
CGCAAAGGACGCCGACAAGGTGCTGCTCAGGCTCGAGAACGACCGGATTGTGCTGCTGCCCGCGGATGCGGGAAATAAGG
AACAGTGA

Protein sequence :
MISCENLVKIYKTADIEVVALQGLNLQVEQGEMMAIIGNSGSGKSTLLNMLGGLDRPSAGKLHVDGKDMLKLTDKELTRY
KRETVGFIWQNKARNLIPYLTARENVEIPMLLHDRKQKRMRAMELLDAVGLGHRANNRLEQLSGGEQQRVAIAIALANRP
KLLLADEPTGALDTRTSAQIMGLLCKLNAELGLTIVIVTHDLSLAKQVKRVVAIRDGRTSSEMILRQSGDAGAGVGADDA
FDTHIEYAVMDRSGRIQVPEHYLEAVGAKDADKVLLRLENDRIVLLPADAGNKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-25 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2278 YP_007213389.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 8e-37 45
Theco_2278 YP_007213389.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-38 44
Theco_2278 YP_007213389.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 9e-35 43
Theco_2278 YP_007213389.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 7e-31 43