Gene Information

Name : Theco_2102 (Theco_2102)
Accession : YP_007213222.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2184067 - 2185392 bp
Length : 1326 bp
Strand : -
Note : PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI

DNA sequence :
ATGAAGGCGTATCGGCTTGACAGTGAGCCCTATCTCGAAGTGCTCCGTTCCGTCGATCCGGTGCGGATGAACGGCAAGGT
GACGCAGGTCATCGGCCTGACCGTCGAATCGGAGGGACCGGATGCGAGCATCGGCGATGTCTGCCTCATCTATCCCGCCA
AATCGGGCAAGCCGATCAAGGCGGAGGTCGTGGGCTTCCGCAACAACAAGGTTTTGTTGATGCCGCTCGGCGAACTGCAT
GCCGTCGGTCCGGGCTGCGATGTCGTCAGCACCTGCAAACCGCTGACCGTGCCGGTCGGCAGCGAGCTGCTCGGTAAAGT
GCTTGACGGGCTCGGACAGCCGCTCGACGGTTCGCGCATACCGGCGCGCATGACGCATTACTCGACGCACAATGTCCCTT
CCAATCCGTTGTTCCGCCCGCGGGTGACCGAACCGCTCGGCATCGGCGTGCGCGCGATTGACGGGTTGCTCACCGTGGGA
CGCGGACAGCGGGTCGGCATTTTCGCCGGCTCCGGCGTCGGGAAGAGCACGCTGCTCGGCATGGTCGCCCGCAACACGTC
CGCCGATGTGAACGTCATCGCGCTCATCGGGGAGCGGGGCCGCGAAGTACTCGAATTCATCGAGAGAGATCTCGGCCCGG
AAGGGCTTGCGCGTTCTGTCGTCGTCGTCGCGACAAGCGACCAGCCGGCACTCATCCGGATCAAAGGCGCGCTGATTGCC
ACGACGATTGCGGAATATTTCCGCGACCGCGGCCTGGACGTCATGCTCATGATGGATTCGGTCACGCGGTTCGCGATGGC
CCAGCGCGAAGTCGGCCTCGCCATCGGGGAGCCGCCGGCCACGCGCGGGTACACGCCGTCGGTTTTCGCCATGCTGCCGA
AGCTGCTCGAGCGCTCGGGAACCGGCAAGACCGGTTCGATCACGGCGTTCTACACGGTGCTCGTGGACGGGGACGACATG
AATGAACCGATTGCCGATGCCGTACGCGGCATCCTCGACGGCCACATCGTGCTCAGCCGCAGCCTGGCGAACAAGGGGCA
TTATCCGGCAATCGACATTCTGGCTTCCGTCAGCCGCGTCATGAACGACATCGTGCCTGCGGAGCAGCTGGAAGCGGCCA
ATCAGTTCAAACGCCTGCTTTCCATTTATAGAGATTCGGAGGACCTCATCAATATAGGGGCGTATCAGCGGGGATCAAAT
GCAGAAATTGATCGCGCGATCGAATATTACGATCGCATCCGCAGTTACGCCATGCAGCGGACGGATGAGAAAGTCAGTTT
CGAGGAGTCGCAGCAGCGGTTGCTCAGCGAGTTCCTGGGAGGTTGA

Protein sequence :
MKAYRLDSEPYLEVLRSVDPVRMNGKVTQVIGLTVESEGPDASIGDVCLIYPAKSGKPIKAEVVGFRNNKVLLMPLGELH
AVGPGCDVVSTCKPLTVPVGSELLGKVLDGLGQPLDGSRIPARMTHYSTHNVPSNPLFRPRVTEPLGIGVRAIDGLLTVG
RGQRVGIFAGSGVGKSTLLGMVARNTSADVNVIALIGERGREVLEFIERDLGPEGLARSVVVVATSDQPALIRIKGALIA
TTIAEYFRDRGLDVMLMMDSVTRFAMAQREVGLAIGEPPATRGYTPSVFAMLPKLLERSGTGKTGSITAFYTVLVDGDDM
NEPIADAVRGILDGHIVLSRSLANKGHYPAIDILASVSRVMNDIVPAEQLEAANQFKRLLSIYRDSEDLINIGAYQRGSN
AEIDRAIEYYDRIRSYAMQRTDEKVSFEESQQRLLSEFLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-102 54
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-103 54
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-103 54
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-103 54
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-104 54
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-101 54
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-104 54
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-101 54
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 6e-104 54
lscN AAO18044.1 LscN Virulence TTSS locus Protein 8e-102 53
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-89 51
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-87 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-87 50
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-86 50
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-86 50
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-86 50
escN CAC81862.1 EscN protein Virulence LEE II Protein 5e-87 49
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-87 49
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 6e-87 49
escN AAK26715.1 EscN Virulence LEE Protein 2e-86 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-87 49
escN AAL57542.1 EscN Virulence LEE Protein 2e-86 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-86 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-87 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-87 48
unnamed AAL06369.1 EscN Virulence LEE Protein 4e-86 48
escN AAC31513.1 L0034 Virulence LEE Protein 3e-86 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-86 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-86 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-86 48
escN AAC38383.1 EscN Virulence LEE Protein 2e-86 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 6e-77 46
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-88 46
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-82 46
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-82 46
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-82 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-83 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-72 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-75 45
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-76 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 3e-76 45
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-71 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-73 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 5e-72 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 5e-72 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 9e-72 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-72 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-72 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 9e-72 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-71 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG2499 Protein 2e-96 55
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-108 54
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0390 Protein 5e-105 54
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0192 Protein 4e-104 54
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG1254 Protein 6e-103 53
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG2331 Protein 6e-97 51
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-104 51
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0515 Protein 9e-87 50
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-86 48
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0730 Protein 1e-86 48
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG1778 Protein 2e-71 44
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG0555 Protein 4e-72 43
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-66 43
Theco_2102 YP_007213222.1 flagellar protein export ATPase FliI VFG2459 Protein 4e-75 42