Gene Information

Name : Theco_2089 (Theco_2089)
Accession : YP_007213209.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2174578 - 2175330 bp
Length : 753 bp
Strand : -
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP

DNA sequence :
ATGAGAAGCAAATTGTGGCTGGCCGCATTCCTGTTGATGGCATCGATCTTCTTGTTCGGCGATCAGGCATCCGCAGCCGT
TCTGCCGAACATCGACATATCGATCGGCGGAGAATCGGAAGAGCCGAATACTTCCGCGCTGTCGCTTCTGCTGCTCATCA
CGGTGCTGAGCATTGCACCGGCGATTCTGGTGCTCATGACGAGCTTCACGCGGATCGTCGTCGTGCTCGGATTTGTCCGC
ATGTCGCTCGGCACGCAGACGAGCCCGCCGAACCAGGTCATTATCGGACTTGCGCTGTTCCTGACCTTGTTCATCATGGC
GCCCACGCTGTCCGAAGTGAACAGCACCGCGCTGCAACCTTATCTGCGCGGCGAAATGACGCAGACCGAAGCGCTCGAAG
CGGCAGCCGTTCCGATGAAAGAATTCATGGCCAAGCATACGCGGGAGAAAGATTTGCTGCTGTTCATGCGCTATGCGCAA
ATGGAACGGCCGGCATCCGTCGAGGATATCCCGCTCACCGTGCTTGTGCCGGCGTTCGCGATCAGCGAACTGAAAACGGC
GTTCCAGATGGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACATGATTGTCTCAAGCACGCTCATGGCGATGGGGA
TGATGATGCTGCCGCCCATGATGATTTCGCTGCCGTTCAAAATTTTGCTCTTCGTCCTGGTGGACGGTTGGTACCTGGTA
GTCAAATCGGCGCTGCTCAGTTTCAATCCATAA

Protein sequence :
MRSKLWLAAFLLMASIFLFGDQASAAVLPNIDISIGGESEEPNTSALSLLLLITVLSIAPAILVLMTSFTRIVVVLGFVR
MSLGTQTSPPNQVIIGLALFLTLFIMAPTLSEVNSTALQPYLRGEMTQTEALEAAAVPMKEFMAKHTREKDLLLFMRYAQ
MERPASVEDIPLTVLVPAFAISELKTAFQMGFMIFIPFLIIDMIVSSTLMAMGMMMLPPMMISLPFKILLFVLVDGWYLV
VKSALLSFNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-18 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-20 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-18 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-18 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-18 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-25 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-25 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG1259 Protein 4e-45 55
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-38 55
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG2494 Protein 6e-41 54
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-39 48
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG0044 Protein 5e-22 41
Theco_2089 YP_007213209.1 flagellar biosynthetic protein FliP VFG0394 Protein 2e-20 41