Gene Information

Name : Theco_1920 (Theco_1920)
Accession : YP_007213046.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2006984 - 2007616 bp
Length : 633 bp
Strand : -
Note : PFAM: IstB-like ATP binding protein

DNA sequence :
TTGCAGCGCGTGCTTTCGTACGAGTTGAAAAAACGGGAAGAAAAGCAGTTTGCCCGTCGGTACAAACGCGCCGCGTTCCC
GGAACTGAAAACGTTGGACGAATTTCGGGTCGACGAACAACCGTCCCTGGGACAACGTCAGTTGCAGCAACTTCGGGAAC
TGATGTGGCTGGAGCAGCATTATAACTTGCTCTTTCTGGGCCCGCCCGGCGTCGGGAAGACGCATCTGGCGATTGGACTG
GGCGTCGAGGCATTGAATCAAGGATATAGCGTCAGTTTCGTCACGATGGATCAGTTGTTGCATCTCTTGAAGACGCAAGA
GATTTCCCGAAACGCCCAGCTGCGGGTGAATCGGATCATCCGTTCCGATCTGGTGATTCTGGACGATCTGATGTTCATGG
CGCTGGATCGGCAGGAGGCTCACTTGTTCTTTCAGTTGATCAACAAACTGTATGGGCAGGCCTCCATCATCCTGACGTCC
AACAAAGGACCGGAAGATTGGGGAGAACTGCTCGGGGATCCGGCCGTCACAACCGCCATTCTGGACCGGATCCTGCATCG
AAGCGAGGTGATTCACCTGACAGGAGACAGCTACCGGCTCAAGCACCGCCAAACCATATTTGGAAATTTCTAG

Protein sequence :
MQRVLSYELKKREEKQFARRYKRAAFPELKTLDEFRVDEQPSLGQRQLQQLRELMWLEQHYNLLFLGPPGVGKTHLAIGL
GVEALNQGYSVSFVTMDQLLHLLKTQEISRNAQLRVNRIIRSDLVILDDLMFMALDRQEAHLFFQLINKLYGQASIILTS
NKGPEDWGELLGDPAVTTAILDRILHRSEVIHLTGDSYRLKHRQTIFGNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-23 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-25 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-25 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-25 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-25 42
unnamed CAA21402.1 - Not tested HPI Protein 5e-25 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-25 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-24 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-25 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-25 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-25 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-25 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1920 YP_007213046.1 DNA replication protein VFG1460 Protein 9e-24 42
Theco_1920 YP_007213046.1 DNA replication protein VFG1627 Protein 2e-25 42
Theco_1920 YP_007213046.1 DNA replication protein VFG1606 Protein 2e-25 42
Theco_1920 YP_007213046.1 DNA replication protein VFG1663 Protein 1e-24 42
Theco_1920 YP_007213046.1 DNA replication protein VFG1515 Protein 2e-25 42