Gene Information

Name : Theco_1889 (Theco_1889)
Accession : YP_007213017.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1976593 - 1977309 bp
Length : 717 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
GTGTCGGAACAGACGGAACGGATTCTGGTCGTGGATGACGAGGAGCGCATCCGGCGGCTCCTGCGCATGTATCTCGAGAA
GGAGAACTATCAGATCGAGGAAGCGGAGGACGGGGAGCAGGCGCTCCGGATGGCACTCGAGCGGGACTACGATCTCGTCA
TTCTCGATCTGATGCTGCCCGGCATGGACGGCATCGAGGTCTGCTCGAAGCTGCGGCAGTCGAAGGCGACGCCGGTGCTC
ATGCTGACCGCCAAGGGCGAAGAGATGAACCGGGTGCAGGGATTCGAAGCCGGCGCGGACGACTACGTCGTGAAACCGTT
CAGCCCGCGCGAAGTCATCTACCGCGTGAAGGCGATCCTTCGCCGCTCTTCGGCGACCGCCTACCTGACGCGGGAGACGC
ACGCAAGCAACAACATCGTGTTCCCGCACCTGATGATCGAACATGATGCGCATCGCGTCACGGCAAACGGGCAGGAAGTC
CAGCTGACGCCGAAGGAATACGAGCTGCTCCACTACCTGGCCCTGTCGCCGGACAAAGTCTTCACCCGGGAAGATCTGCT
GAAAGATGTATGGAACTACGAGTTCTTCGGCGACCTGCGCACGGTGGACACCCACGTGAAGCGGCTGCGCGAGAAGCTGA
ACCGGGTGTCGCCGGAAGCGGCGGCGATGATTACGACGGTTTGGGGCGTCGGATACAAACTCGAGGTGCCGAAGTGA

Protein sequence :
MSEQTERILVVDDEERIRRLLRMYLEKENYQIEEAEDGEQALRMALERDYDLVILDLMLPGMDGIEVCSKLRQSKATPVL
MLTAKGEEMNRVQGFEAGADDYVVKPFSPREVIYRVKAILRRSSATAYLTRETHASNNIVFPHLMIEHDAHRVTANGQEV
QLTPKEYELLHYLALSPDKVFTREDLLKDVWNYEFFGDLRTVDTHVKRLREKLNRVSPEAAAMITTVWGVGYKLEVPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-38 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-38 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 9e-48 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 8e-48 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 8e-48 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-47 49
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 9e-49 47
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 6e-48 45
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-41 45
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 2e-41 43
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-40 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 1e-37 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 5e-39 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 1e-37 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 5e-39 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 1e-37 42
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene2255. Protein 1e-38 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain U35369.1.gene1.p01 Protein 1e-38 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 4e-35 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 2e-42 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 4e-30 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 1e-36 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_008702.1.4607594. Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 2e-38 41
Theco_1889 YP_007213017.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 4e-38 41