Gene Information

Name : Theco_1795 (Theco_1795)
Accession : YP_007212924.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1892964 - 1894388 bp
Length : 1425 bp
Strand : -
Note : PFAM: Arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein

DNA sequence :
TTGGCCGCGGTTGCCTTGTCCATTTTCATTGTCACGATTGCGCTCATTATTTGGCAGCCCAGGGGACTTCCTGTCGGCTG
GACCGCGTCGGGGGGCGCCTTGCTGGCGCTCGCCGCCGGGGTGGTCAACTTGAGGGATGTCGGCGACGTTGCCGGGATCG
TCTGGAATGCGACGCTCGCCCTCGTGGCCGTCATGCTCATCTCGTCGGTGCTGGAGAAAGCCGGCTTCTTCGAATGGGCC
GCGCTGCATATGGCGCGGCGGGCGCGCGGCGACGGGCTGCGCATGTTTCTGCTGATCATCGTGCTCGGCGCGGCCGTATC
CGCGCTGTTCACGAACGACGGCGGCATTCTGATCATGACGCCGATCGTGCTTGCCATGGTCCGCGCGCTCGATTTCGACG
CCCGGACGGTCGTGCCGTTCGTGATGGCGACCGGATTCATCGCGGACACGACTTCGCTGCCGCTCGTCATCAGCAATCTG
GTCAACATCATTTCCGCCGACTTCTTCGGCATCGGGTTTGCCGCATACGCGAGCCGGATGATCGTGCCGAATCTGGTCGC
CGCCGCCGCCAGCCTGCTCGTCCTGTATCTGTATTTCCGGAAGAGCATCCCGGCCGGCTATGACTTGTCCCGGCTGAAGC
ATCCGAAGGAAGCGATCCGGGATCCGCGGATGTTCCGGTGGGCGTGGGCGGTGCTTGGCATTATGCTGGTCTCCCTGTTC
GCCGGCGAAGCGCTGGACATTCCCGTATCGGCCCTGGTCGGCGCCGCCGCTGTCCTGCTGCTCGCCATCGCGCGGCGAAG
TCCGGTCATCAACACGAAGCAGATTGTCAGGGATGCGCCCTGGAGCATCGTCGTGTTCTCGATCGGGATGTACGTCGTCG
TGTACGGTCTTCGGAACGCCGGACTGACCGACCTGCTGAGCCGCTTCATCGAACATGCCGCCGGATGGGGATGGTACGCG
GCGACGATCGCGATGGGCCTGCTGGCGGCCGTGCTGTCTTCCGGCATGAACAATCTGCCGGCGGTCATGATCGGCGCGCT
GGCCGTCTCCGGCACGGAGACCGGAGGCTTCATCCGCGAAGCGCTCATCTACGCGAATGTGATCGGTTCGGATCTGGGAC
CGAAAATGACGCCGATCGGCTCGCTCGCCACGCTGCTGTGGCTGCACGTGCTGTCCGCGAAGCAGGTGAAGATCGGGTGG
GGGGATTATGTCAAAGCCGGCGTAATCCTGACCGTGCCGACGCTGCTTGCGACGCTGTCCGGTCTGGCCGCATGGCTGTA
TGCGCTCCACGAACTCCGTTGGAACGCCTGGCTCGCGATCGCGCTCATCGCCGCGGCGTTCGCCGCCATCGCGCTGGTTC
GCAGCGTCGTAAAAGCGGCGAAGCTGCATCGGCACAAGCGGGGGCCTGCCGTATCCGGCCGCTGA

Protein sequence :
MAAVALSIFIVTIALIIWQPRGLPVGWTASGGALLALAAGVVNLRDVGDVAGIVWNATLALVAVMLISSVLEKAGFFEWA
ALHMARRARGDGLRMFLLIIVLGAAVSALFTNDGGILIMTPIVLAMVRALDFDARTVVPFVMATGFIADTTSLPLVISNL
VNIISADFFGIGFAAYASRMIVPNLVAAAASLLVLYLYFRKSIPAGYDLSRLKHPKEAIRDPRMFRWAWAVLGIMLVSLF
AGEALDIPVSALVGAAAVLLLAIARRSPVINTKQIVRDAPWSIVVFSIGMYVVVYGLRNAGLTDLLSRFIEHAAGWGWYA
ATIAMGLLAAVLSSGMNNLPAVMIGALAVSGTETGGFIREALIYANVIGSDLGPKMTPIGSLATLLWLHVLSAKQVKIGW
GDYVKAGVILTVPTLLATLSGLAAWLYALHELRWNAWLAIALIAAAFAAIALVRSVVKAAKLHRHKRGPAVSGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-100 57
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-108 55
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-109 55
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-107 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0578 Protein 2e-98 57
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0576 Protein 3e-98 57
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0577 Protein 4e-99 57
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0031 Protein 1e-97 56
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0574 Protein 3e-110 55
Theco_1795 YP_007212924.1 arsenical pump membrane protein BAC0575 Protein 1e-110 55