Gene Information

Name : Theco_1085 (Theco_1085)
Accession : YP_007212257.1
Strain : Thermobacillus composti KWC4
Genome accession: NC_019897
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1133770 - 1134294 bp
Length : 525 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGTTGAAGATGAGCGGCATCGACGTCTGCCGCGAGCTGCGCCGCACAAGCAACGCGGGCATCGTCATGGTGACGGCGCG
GGCCGATGAGACGGACAAAATCATCGGCCTGGAAGTCGGCGCCGACGATTATGTGACGAAGCCGTTCTCGCTGCGCGAGC
TGCACGCCCGCGTCCGCTCGCTGATCCGGCGGCTGGAAGGGCGCGGCGAGCCGCAGGACAAGCTGCTCAAGCGGGGCGAC
CTCACGATCTCGGAGTCGCAGATGCGCGTCTGGAAGCGCGGGGTCGAAATTGCCCTGACGCCGACCGAATTCCGGCTGCT
CACCGCGCTGGCGGCCAGACCGGGCATCGTCTACAGCCGGCTTCAACTGCTGCAGGCCGCGATGGAGGACGATTACCTGA
ACGATGAGCGGACCGTCGACGCCCATATCAGCAAGCTGAGGAAGAAAATCGAGGACGATCCGTCGAAACCGGCATTCATC
CAGACCGTATACGGATTCGGCTATCGGTTCGGAGGCGGCGCATGA

Protein sequence :
MLKMSGIDVCRELRRTSNAGIVMVTARADETDKIIGLEVGADDYVTKPFSLRELHARVRSLIRRLEGRGEPQDKLLKRGD
LTISESQMRVWKRGVEIALTPTEFRLLTALAARPGIVYSRLQLLQAAMEDDYLNDERTVDAHISKLRKKIEDDPSKPAFI
QTVYGFGYRFGGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-27 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 7e-28 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 3e-31 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 1e-30 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 3e-31 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 3e-31 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 1e-30 46
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 2e-35 45
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 2e-35 45
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 2e-35 45
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 4e-30 45
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 9e-32 45
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 3e-25 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-26 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 3e-28 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 4e-31 44
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 5e-28 43
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 5e-24 43
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 4e-28 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 1e-27 43
Theco_1085 YP_007212257.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 2e-27 43