Gene Information

Name : Sinac_7219 (Sinac_7219)
Accession : YP_007206962.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9160560 - 9161267 bp
Length : 708 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAGTTCAAAGAAAGTCCTGGTCATCGAGGATGATCCGGCGATTCGCCGGGGCTTGATCGACGCCCTGGCGTTCGCCGG
ATATGCCACATTGGAGGCGAGCGACGGTCTCGTGGGCTGTCGCACGGCTCTCGACGCCGATTGCGACCTCCTTTTGCTCG
ACCTTGTTCTGCCCGGGCGCGATGGGCTGGACATCCTCCGCGCGGTCCGTCTGGCCCGGCCGACCCTGCCTGTGATCGTC
CTGACGGCCCGCGCCTCGGAAGATGACCGCGTGCGAGGATTGTCTTCCGGATCGGACGATTACATCATCAAGCCATTCAG
TATTCGCGAACTGCTGGCACGGGTTGAAGCCGTCCTGAGGCGATCGCCCGGTCGGCCGCCAGGCATCCGCCGGGTCAAAT
TCATCGGGGGCCTGGCCGATCTGGAGCGGCGCGAGGTGCGGTTCGACAATGGCGAACGCAGCGACCTTTCCGAGCGAGAA
AATCAGCTCCTCCTCTACCTCGCCAGCCACACGGAACGGGTGATCTCTCGCGAGGAGATCCTCGCTCAAGTCTGGGGGCT
CGACCCAGCAGGGATCACGACCCGGACGATCGACATGCACGTGGCCCGCCTTCGCGAGAAGCTGCGCGACGACTCGGTAC
GGCCACGGATTATCCTGACGGTGCGTGGACTTGGCTACATGCTTCATGCCGGGGGCGTGACCCCATGA

Protein sequence : 
MSSKKVLVIEDDPAIRRGLIDALAFAGYATLEASDGLVGCRTALDADCDLLLLDLVLPGRDGLDILRAVRLARPTLPVIV
LTARASEDDRVRGLSSGSDDYIIKPFSIRELLARVEAVLRRSPGRPPGIRRVKFIGGLADLERREVRFDNGERSDLSERE
NQLLLYLASHTERVISREEILAQVWGLDPAGITTRTIDMHVARLREKLRDDSVRPRIILTVRGLGYMLHAGGVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_7219 YP_007206962.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 4e-21 46
Sinac_7219 YP_007206962.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 3e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_7219 YP_007206962.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 1e-20 42
Sinac_7219 YP_007206962.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-19 41