Gene Information

Name : Sinac_0684 (Sinac_0684)
Accession : YP_007200791.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 840330 - 841076 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGATTGACGTGGTCGACGTGCGGAAGTCGTATCGAAGCGGAGACCGTACGGTCGACGCCCTCCGTGGGGTCCGCTGTCG
CGTGCCCAAGGGGCGGTTCGCGTTTATCGTCGGTCCCTCCGGGTCGGGCAAGAGTACCTTGCTCTACCTGCTCGGCGCTC
TCGACCGTCCGACCTCCGGGTCGATCCTGGTCGAGGGGCAAGACCTGACCACGATGTCCGAGGCCGAGCAGAACGCGTAT
CGCCGCGATCGGGTCGGGTTCATCTTCCAGTCGTTCAACCTGATCAGCAACCTGACAGCCGTCGAGAACGTGCTGGTCCC
CTTCCTGCCGCGCGGGATGACGCCCGAGCTGAAGGAGCGGGCCGAAGCGTTGCTCAGAGACGTCGGCCTGGGCGATCGGC
TCGACCATCGCCCTTACCAGATGTCGGGCGGCGAGCAGCAGCGCGTCGCGATCGCACGCGCCCTGATCAAGGATCCGATC
CTCGTGCTGGGCGATGAGCCGACCGGCGAACTCGACTCGAAGACGGGTGACGAGATCTACCGGATCCTTCGCCGGCTGCA
AGTCCAGCGGGAGACGACCCTGGTGATCGTCACCCACGACCGGCGCTTCATCACCCCCGACGACCTGGTGCTCGAGATCC
AGGACGGTGTCCTCAAAGTTGACGACAGCCTGTTAGAGGCGGAGGATGACCTTCCCGAAACCATGATTGGATTCGAGCCG
GGTCTGCGCCGCCCGGACGTCGTCTAG

Protein sequence : 
MIDVVDVRKSYRSGDRTVDALRGVRCRVPKGRFAFIVGPSGSGKSTLLYLLGALDRPTSGSILVEGQDLTTMSEAEQNAY
RRDRVGFIFQSFNLISNLTAVENVLVPFLPRGMTPELKERAEALLRDVGLGDRLDHRPYQMSGGEQQRVAIARALIKDPI
LVLGDEPTGELDSKTGDEIYRILRRLQVQRETTLVIVTHDRRFITPDDLVLEIQDGVLKVDDSLLEAEDDLPETMIGFEP
GLRRPDVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_0684 YP_007200791.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-32 47
Sinac_0684 YP_007200791.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-37 44
Sinac_0684 YP_007200791.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 5e-30 44