Gene Information

Name : Sinac_6682 (Sinac_6682)
Accession : YP_007206451.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8416464 - 8417900 bp
Length : 1437 bp
Strand : -
Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCCTTGGGGCAGGGTTTCTTTTGGATAGACGCGGCCATCGATCGTCGCACGGCAACCGACCGGCTCTCGGAGGAGAA
TACTCGCACCATGACTCAGATCGAAAAGGCGCGACAGGGGATCGTGACACCCGAGATGGAGTATGTCGCCGGCCGCGAGA
ATCTGGAACCCGAGTTGGTTCGATCCGAGGTGGCGCGGGGGAGGATGGTCATCCCGGCCAACATCGTGCACCTGAAGCAG
GGCCTTCAGCCGATGGGGATCGGCATCAAGGCCAAGTGCAAGATCAACGCCAACATCGGCAACTCGGCGGTCACCTCCGA
CATCGACAACGAACTGGCCAAACTCAAGATGGCCGTCGACCTCGGTGCCGATACGGTAATGGACCTCTCGACCGGGGGCA
ACATCAACGCGATCCGGGACGCGATCGTCGCGGCCAGCCCGGTCCCGATCGGAACCGTGCCGATCTACCAGGCGATTCAG
CAGGTCAAGCACGTGGAAGACCTCACCGAGCAGGACCTGCTCGACGTGGTCGAGCACCAGGCGAAGCACGGGGTCGACTA
CATGACCCTGCACGCCGGAATCCGCCGCGAGTACATCGCCTTGACCGCGAATCGGGTCACCGGCATTGTGTCGCGAGGCG
GTTCTCTGATGGCGCAGTGGATGATGGCGCACAAGAAAGAGAATCCGCTCTTCACCCGGTTCGACGACCTCTGCGACATC
ATGCGGCAGTATGATGTCACCTGGAGCCTGGGGGACAGCCTCCGCCCCGGTTCCATCGCTGACGCCTCCGACGCAGCGCA
GTTCGCCGAGCTCAAAACGTTGGGCGAGTTGACCCGCCGCGCGTGGGCGCGGGGCTGCCAGGTGATGGTGGAGGGTCCCG
GGCACATCCCGATGGACCAGATCGCCATGAACATGGAGAAGCAGGCGATCGAGTGCAGCGAGGCGCCTTTCTACGTCCTT
GGCCCGCTCGTGACCGATATCGCACCCGGCTACGATCACATCACCTCAGCGATCGGCGCGGCCCTGGCGGGCTGGCACGG
TGCGAGCATGCTCTGCTACGTCACGCCCAAGGAACACCTGGGCTTGCCCGAAGTCGAAGATGTCCGCCAAGGAGTGATCG
CCTATAAGATCGCTGCCCATGCGGCCGACCTCGCCCGCCACCGTCCGGGTGCCCGCGACCGCGACGATGCGCTGAGCCGA
GCCCGGTACTCGTTCGACTGGGAGCAACAGTTCGCTCTCTCGCTCGATCCCGAGACCGCCCGGCGGATGCACGACGAGAC
GCTCCCGCAGGACGCCTTCAAAACGGCCGCATTCTGCAGCATGTGCGGTCCGAAGTTCTGCTCGATGCGGATCACCGAGG
ACTTGCGCAAGCACGCCCTCGAGGCCGCCTCCCTCGTGCAACTCGGCGAACCCGAGGCGGCGGGCGCGAGAAACTGA

Protein sequence :
MSLGQGFFWIDAAIDRRTATDRLSEENTRTMTQIEKARQGIVTPEMEYVAGRENLEPELVRSEVARGRMVIPANIVHLKQ
GLQPMGIGIKAKCKINANIGNSAVTSDIDNELAKLKMAVDLGADTVMDLSTGGNINAIRDAIVAASPVPIGTVPIYQAIQ
QVKHVEDLTEQDLLDVVEHQAKHGVDYMTLHAGIRREYIALTANRVTGIVSRGGSLMAQWMMAHKKENPLFTRFDDLCDI
MRQYDVTWSLGDSLRPGSIADASDAAQFAELKTLGELTRRAWARGCQVMVEGPGHIPMDQIAMNMEKQAIECSEAPFYVL
GPLVTDIAPGYDHITSAIGAALAGWHGASMLCYVTPKEHLGLPEVEDVRQGVIAYKIAAHAADLARHRPGARDRDDALSR
ARYSFDWEQQFALSLDPETARRMHDETLPQDAFKTAAFCSMCGPKFCSMRITEDLRKHALEAASLVQLGEPEAAGARN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 9e-124 61
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 9e-124 61
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 8e-117 57