Gene Information

Name : Sinac_6584 (Sinac_6584)
Accession : YP_007206354.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8280392 - 8282989 bp
Length : 2598 bp
Strand : +
Note : PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS

DNA sequence :
ATGAGCGATCCGCCTCTCACGCCGATGATGCAGCAGTATCGCGAGCTCAAGGCCCGCGATCCTGATGCGCTCTTGCTCTT
CCGCATGGGCGACTTCTACGAGATGTTCGGCGAAGATGCCGAGCGGGCCGCCCCCCTGCTCGGCCTCGCCCTGACCGCGC
GCGACAAGGGACCCAACGCCGTCCCGATGGCGGGCTTCCCCCACCCCGCGCTGGAGTCTTACCTGGCCAAGCTCGTCCAG
GCCGGCCAACGCGCCGCGGTCTGCGAGCAGGTCGAGGATCCGAAGCAGGCCAAGGGCCTCGTCAAGCGCGAGGTCGTCCG
GGTGGTGACGCCAGGGACCTTGACCGACGAGGCTCTGCTCGACCCGAAGAGCGCCAACTACCTGGCGGCCGTCGTCGAGT
CCTCGGGCAAGCTCGGCCTGGCCTGGGTGGAACTGTCGACCGGCCGGTTCTCGCTGACTGGTGTCTCGCGCACCGAGCTA
ACGGACGAGATGGCCCGGCTCAACCCGGCCGAGACCCTGGTCTCGGAGATCAGCCTCGACTCTCCATGGGTCCGCACCTT
GCGCACCCACCTCGGGCCGACGATCACGTCGCGTCCCTCGTGGGACTTCGTCTCGGAGCAAGCGCGGAACACCCTGAACG
AGCACTTCGGGATCACGACCTTGGCCGGGTTCGGCATCGACGACCAGGCCCCCGAGGTCGCGGCCGCCGGTGCCTTGGTG
GCCTATCTCCGCGACACCCAGAAGTCCTCGCTCGGCCACCTCACGCGGCTGACCCCCTATCGTCGGGCTGATGTCCTGGC
ACTCGATGAAATGACGCGCCGGAGCCTCGAGCTGACCCGAACCCTGCGCGACGGCAAGCGGGACGGCTCGCTCCTCCAGG
TCATCGACCGGAGCTGCACGCCCATGGGGGCCCGCCTCTTGGCCGACTGGCTGACCTCTCCTTTGACCCACCTGGAACCG
ATCGCCGAGCGCCACGAAGCGGTCGGCGAGTTGCTCGGCGACTCGTTGTTGCGCAGCGATCTCCGCTCGTCCCTGGGCCA
GGCGTACGACCTCGAGCGGCTGGCGGCGCGGGTCGGAACCGGCCGTGCCACCCCGCGCGACCTGGCCGCCCTGGCCCGGA
CACTCGCCCTCCTCCCCAAGATCCGGGCGCGGTTGACCGCCCGCTCCTCGAAGCGGCTCAACCAGCTCGAAGCCGCGTTG
GAGCTCTGCCCCGAAGTCCGGTCCGCGATCGAAGCCGCTTTGGTGGACGACCCTCCCCTGACGATCAAGGAGGGGGGCCT
GATCCGCGAGGGGTATCACCCCGACCTTGACGAACTCCGTGAAATTGCTCGAGGGGGCAAGTCGTGGATCGCCAAGTTCC
AGTCGGAGCAGGTTCGCCGAACGGGCATCGCGAACCTCAAGGTTGGTTTCAACAAGGTCTTCGGCTACTACATCGAAATT
AGCCACGCGCAAGGCTCGAAGGTCCCCCCCGACTTCATCCGCAAGCAGACGGTCAAGAACGCCGAGCGGTACATCACCCC
CGAGCTCAAGGAGTACGAGGACAAGGTCCTCCGCGCCGAGGATCGGGCGAACGAGCTCGAATATGAACTCTTTACGACTC
TTCGCGACCGGGTTGCGGCCGAAGCGCCCCGTTTAATTCAGGCGGGAGCCGTCCTGGCCCAGGTCGACGTGCTCTCCGCG
CTCGCCGAGCTGGCCGCGCGGCACGGCTACTGCCGCCCCGAGATGGTGGCCGAGCCGGCCCTTGAAATCGAGGTCGGGCG
GCATCCGGTGCTCGACGTGCTGATGCCCCCGGGCGACTTCGTCCCCAACGACACCCGGCTCAGCCCCAACGACGGCACGA
TCGTCGTGATCACAGGGCCGAACATGGCGGGGAAGAGCACTTTCATCCGCCAGGTGGCCCTGCTCACGATCCTGGCCCAG
ATCGGCAGTTTCGTCCCGGCCCGACGCGCCCGGATCGGAGTCGTCGACCGCCTCTTCGCCCGTGTCGGCGCCACCGACGA
GCTCAGCAGGGGCCAGAGCACGTTCATGGTCGAGATGACCGAGACCGCCAACATCCTCAACAATGCCACGGCGCACAGCC
TGGTCATCCTCGACGAGATCGGTCGAGGGACCAGCACCTTCGACGGCATCTCCCTGGCCTGGGCGATTACCGAGCACCTG
CACGACGTGGTCGGCTGCCGGACCCTGTTCGCAACCCACTACCACGAGCTCGTCGAGCTCGAAAAGACCAAGCCAAGGCT
CCGCAACGCGAACGTCGCGGTTCGCGAAAGCGAAGGGGAAATCGTCTTCCTCCACCGGATCGTGCCCGGCGGCGCTGACC
AGAGCTACGGAATCCACGTCGCCCGATTGGCCGGCGTCCCTGCCCCGGTGCTCGAACGGTCCCGCGAAATCCTCGCCTTC
CTCGAAAAGCAGCACGGCCCCGACCCCGGACCGCCAGCCGGCCCGATCCGCAAGGTCAGGTCAGGCCGGGCCCTGACCGG
CAGCCTCTTCGCCGCCTTGCCCGACCCGCTGCTCGACGAACTCCGCAAAATCGACCCGGCCACCCTGGCTCCGGACCAGG
CTGTCGAACTCGTCAAGCGGCTCCGCGAGCTGGCCTGA

Protein sequence :
MSDPPLTPMMQQYRELKARDPDALLLFRMGDFYEMFGEDAERAAPLLGLALTARDKGPNAVPMAGFPHPALESYLAKLVQ
AGQRAAVCEQVEDPKQAKGLVKREVVRVVTPGTLTDEALLDPKSANYLAAVVESSGKLGLAWVELSTGRFSLTGVSRTEL
TDEMARLNPAETLVSEISLDSPWVRTLRTHLGPTITSRPSWDFVSEQARNTLNEHFGITTLAGFGIDDQAPEVAAAGALV
AYLRDTQKSSLGHLTRLTPYRRADVLALDEMTRRSLELTRTLRDGKRDGSLLQVIDRSCTPMGARLLADWLTSPLTHLEP
IAERHEAVGELLGDSLLRSDLRSSLGQAYDLERLAARVGTGRATPRDLAALARTLALLPKIRARLTARSSKRLNQLEAAL
ELCPEVRSAIEAALVDDPPLTIKEGGLIREGYHPDLDELREIARGGKSWIAKFQSEQVRRTGIANLKVGFNKVFGYYIEI
SHAQGSKVPPDFIRKQTVKNAERYITPELKEYEDKVLRAEDRANELEYELFTTLRDRVAAEAPRLIQAGAVLAQVDVLSA
LAELAARHGYCRPEMVAEPALEIEVGRHPVLDVLMPPGDFVPNDTRLSPNDGTIVVITGPNMAGKSTFIRQVALLTILAQ
IGSFVPARRARIGVVDRLFARVGATDELSRGQSTFMVEMTETANILNNATAHSLVILDEIGRGTSTFDGISLAWAITEHL
HDVVGCRTLFATHYHELVELEKTKPRLRNANVAVRESEGEIVFLHRIVPGGADQSYGIHVARLAGVPAPVLERSREILAF
LEKQHGPDPGPPAGPIRKVRSGRALTGSLFAALPDPLLDELRKIDPATLAPDQAVELVKRLRELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 4e-137 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_6584 YP_007206354.1 DNA mismatch repair protein MutS VFG0562 Protein 2e-145 43