Gene Information

Name : Sinac_5496 (Sinac_5496)
Accession : YP_007205333.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Unknown
Product : ssrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6877256 - 6877765 bp
Length : 510 bp
Strand : -
Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein

DNA sequence :
ATGGCCAAGAGCGGCGGCGGCAAGAATTCATCCAAGAGCGACGCCGACGAAAATGCAATCAAGATCGTCGCCCGAAACCG
CCGCGCCCGCTTCGAGTACGAGTTGCTCGATAAAGTTGAGGCGGGGATCGTCCTGACCGGCACCGAGGTCAAGAGCCTCC
GCAACGGTAAAGCGAGCCTGGAAGAGTCCTACGCCGGTATCAGCAGCGATGAAGTCTGGCTCTACGGGTGCGACATCCCG
GAGTATCTCCAAGCCAACCGGATGAACCACAAGCCGAAGCGTCCAAGGAAGCTCCTACTCCATCGCAGCGAGATCGACAA
GCTCCTCGCCAAGGCTTCGGAACGTGGTCTGACCATCGTCCCCTTGATGGTCTACTTCAAAAAAGGGATGGCGAAGGTCG
AGATCAGCATCGCGCGCGGCCGCAAGCTCCACGACAAGCGTGAAGCCCTCAAAACCAAGGATGCAAAGCGCGACATCGAC
CGCGCCGTTCGAGGACGTGGCCGCGATTAA

Protein sequence :
MAKSGGGKNSSKSDADENAIKIVARNRRARFEYELLDKVEAGIVLTGTEVKSLRNGKASLEESYAGISSDEVWLYGCDIP
EYLQANRMNHKPKRPRKLLLHRSEIDKLLAKASERGLTIVPLMVYFKKGMAKVEISIARGRKLHDKREALKTKDAKRDID
RAVRGRGRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 3e-29 50
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-29 50
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-20 42