Gene Information

Name : Sinac_5021 (Sinac_5021)
Accession : YP_007204870.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6264979 - 6265689 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCAACTCATCTCTCGGCCGTCGGGGTGGAAAAGAGTTATCGGAAAGGGAAGAACCAGGTTCCCGTGCTCCACGGCGT
CGACATGGACGTCGAGCACGGCGAGCTCGTCGCGATCGTCGGCGCCAGCGGTTCGGGCAAGAGCACGCTCATGCACGTCA
TGGGCCTGCTCGACTCGCCCGACGCAGGTTCGGTCACTCTGGACGGACAGCGCATCGACAACCAGTCCGATCGCCGTCGC
GACGAGCTGCGCAATCAGACCTTCGGGTTCATCTTCCAGTTCTACCACCTGCTCCCTGAGCTCTCGGCGCTCGAAAACGT
GATGATGCCCCAGTTGATCCGCCACGGCCTCTGGTCGTACATGGGGCAACGGGGCCGCATCCGTCGTGAAGCGACCGCCC
TCCTGGAACGGGTCGGCCTGGGACACCGCCTCAACCATCTGCCCACGGAACTCTCCGGCGGCGAAATGCAGCGGACGGCG
ATCGCACGCGCCCTGGCCGGAGGGCCCGAAGTGCTCTTGGCCGACGAGCCGACCGGCAACCTCGACGCGGCGACCGGTCA
AGGGGTTCTCGAGTTGCTCCGCGACTTGAACCGCGAACGCGGACTCACTATGATCATGGTCACCCACGACCCTCAGATTG
CCCTGCAAGCCGATCGGGTCGTTCGGCTCGCCGAGGGGCGAATCGAGGAATGGGCCCCCGCTTTAGCCTGA

Protein sequence : 
MATHLSAVGVEKSYRKGKNQVPVLHGVDMDVEHGELVAIVGASGSGKSTLMHVMGLLDSPDAGSVTLDGQRIDNQSDRRR
DELRNQTFGFIFQFYHLLPELSALENVMMPQLIRHGLWSYMGQRGRIRREATALLERVGLGHRLNHLPTELSGGEMQRTA
IARALAGGPEVLLADEPTGNLDAATGQGVLELLRDLNRERGLTMIMVTHDPQIALQADRVVRLAEGRIEEWAPALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-37 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_5021 YP_007204870.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-45 47
Sinac_5021 YP_007204870.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-31 45
Sinac_5021 YP_007204870.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-36 41
Sinac_5021 YP_007204870.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 3e-40 41