Gene Information

Name : Sinac_4799 (Sinac_4799)
Accession : YP_007204657.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5981562 - 5982356 bp
Length : 795 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
GTGAACATCACGACGAAGGTGATCGTCCGGCTGGCTGACGTTCGCAAGACCTACGTGATGGGCCACGCTAACGAAGGGGG
CTTTTTCAGCCGCCGCAAGAGCGTGACCCAGGCCGTGACGGTCCACGCCCTGACGGGAGTCTCCGTCGACTTCCATCAGG
GCGAGTACATCGCCATCATGGGGGCCTCGGGGTCGGGCAAGAGCACCATGCTCAACTTACTCGGCTGCCTCGATCGCCCC
ACCAGCGGTCAGTACATCTTGGGGGACAAGGATGTCGCCCAACTCAGCGACGACGAGCTGTCGGAAGTCCGAAGCCGCTA
CATCGGCTTCATCTTCCAGTCTTATAACCTGATCCAGCAGTACACCGTCACGGAGAACATCCAGCTCCCCCTGACGTACC
AAGGGAGCGGTGAGATCACCGAGGAGGTTCAACGCCGAACCTACGAGCTGGCGCGAATGGTCGGCCTTCACGAACGCCTG
GACCACCGCCCCAACCAGCTCTCCGGCGGTCAACAACAGCGAGTCGCGATCGCGCGCTCGCTGATCAACGACCCCTACAT
CATCCTGGCCGACGAAGCGACCGGTAACCTCGACACCAAGACCAGCCACGAGATCATGGAGATGCTCGGCAAGCTCAACG
ACGCGGGCAAGACCATCATCATGGTCACCCACGAAGACGACATCGCCGAGCACGCCAAACGGATCATCCGCATGCGTGAC
GGCCAGATCATCGACGACGGCCCGAGCCCTCGAATGCAGGCGCTCGCCGGGACCAACGGCGTCGGTCACGCGTAA

Protein sequence :
MNITTKVIVRLADVRKTYVMGHANEGGFFSRRKSVTQAVTVHALTGVSVDFHQGEYIAIMGASGSGKSTMLNLLGCLDRP
TSGQYILGDKDVAQLSDDELSEVRSRYIGFIFQSYNLIQQYTVTENIQLPLTYQGSGEITEEVQRRTYELARMVGLHERL
DHRPNQLSGGQQQRVAIARSLINDPYIILADEATGNLDTKTSHEIMEMLGKLNDAGKTIIMVTHEDDIAEHAKRIIRMRD
GQIIDDGPSPRMQALAGTNGVGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_4799 YP_007204657.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-41 51
Sinac_4799 YP_007204657.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 5e-46 50
Sinac_4799 YP_007204657.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-43 49
Sinac_4799 YP_007204657.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 8e-37 47