Gene Information

Name : Sinac_4386 (Sinac_4386)
Accession : YP_007204273.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5435206 - 5435904 bp
Length : 699 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGATGCCTGACCGGCCGGGCGAACTGATTACGCTGGAGGGGATCACCAAGGAATACCCGATGGGGGGCGAGATCGTTCG
CGCGCTTCAAGGGGTCGACCTGGCGATCGGGACCAACGAGCTGGTCGCGATCATGGGGCCGTCCGGGTCGGGGAAATCCA
CCTTGATGAACATTCTTGGTTGCCTCGATGTGCCGAGCGCGGGGCGGTACTGGCTGGAGGGCCGCGACGTGGCGCGGCTT
TCGCAGTCGGAGCTGGCGCGGGTCCGTGGGGGGCAGATCGGCTTCGTTTTCCAGACGTTCGAGCTTTTGCCACGACAGAC
GGCCTTGCGGAACGTCGAGCTTCCGTTGACCTACTCGGGGGGGGCGAACCGCCGAGGCCGCGCGACCGAGGCGCTGCGGC
GGGTCGGGCTGGCCGACCGGATGGGGCACCGGCCCAATCAGATGTCGGGGGGACAGCGGCAGCGGGTGGCGATCGCGCGT
GCCTTGGTTCAGCGCCCGGCCTTGCTGCTGGCGGATGAGCCGACCGGCAACCTCGACACGCAGACCGGTGAGGAGATCCT
CAACCTCTTCGCCGACCTTCATCGCGAAGGGCAGACCATCGTCATCGTCACCCACGAGCCCGAGGTCGCCGCACGCTGTC
ATCGCGTTGTCCGGATCCGAGACGGCCGGGTTGAGTCGGACCTCGAGACCGGAAATTAG

Protein sequence :
MMPDRPGELITLEGITKEYPMGGEIVRALQGVDLAIGTNELVAIMGPSGSGKSTLMNILGCLDVPSAGRYWLEGRDVARL
SQSELARVRGGQIGFVFQTFELLPRQTALRNVELPLTYSGGANRRGRATEALRRVGLADRMGHRPNQMSGGQRQRVAIAR
ALVQRPALLLADEPTGNLDTQTGEEILNLFADLHREGQTIVIVTHEPEVAARCHRVVRIRDGRVESDLETGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_4386 YP_007204273.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-58 55
Sinac_4386 YP_007204273.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-48 53
Sinac_4386 YP_007204273.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-39 42
Sinac_4386 YP_007204273.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 2e-34 41