Gene Information

Name : Sinac_4142 (Sinac_4142)
Accession : YP_007204047.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Unknown
Product : short-chain alcohol dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5163232 - 5163963 bp
Length : 732 bp
Strand : +
Note : PFAM: short chain dehydrogenase

DNA sequence :
ATGTCCGGAATCCAACAGAAGGTCGTCGTGATCACGGGAGCCAGCAGCGGCATCGGCGAGGCGACCGCGATGCACCTCGC
CCGCCACGGGGCGCGCGTCGTGGTCGGGGCCCGTCGTACCGACCGGCTGGAGAAGCTCGTCTCGGCCATCCGCGCCGGGG
GCGGTACGGCGGAGTACCAGGCCGTGGACGTCACGAAGCGTGAGCAGGTCGAGGCGCTCGTCCGCCTTGCGAAGGCCAAG
TTCGGGCGAGTGGACGTCGTGGTGAACAACGCCGGGATCATGCCGCTCTCGCCCCTTGAGGCGCTGAAGGTGGACGAGTG
GGACCGCATGATCGACGTGAACATCAAGGGCCTGCTTTACGGCATCGCCGCCGGGATGCCGGTCTTCAAGGAACAGAAGG
CCGGGCACTTCGTGAACGTCTCATCCATTGGCGGCCACTTCGTCGTCCCGACCGCTGCCGTGTACTGCGCCACCAAGTTC
GCGGTCCGCGCGATCTCCGACGGCCTGCGGCAGGAGTCCAGGGACGTCCGGGTGACGATCATCTCCCCCGGCGTGGTGGA
GTCGGAACTGGCCGACACGATCACGGACGAGGGAGCAAAGAAGGCGATGGACGAGTTCCGGGCCAACGCGATACCCCCGG
AGGCGATCGCGCGCGCCATCCTCTTCGCGATCGAGCAGCCCGCCGACGTCTCGGTCAGTGAGATTATCGTCCGGCCCACG
GGCGGCGCGTGA

Protein sequence :
MSGIQQKVVVITGASSGIGEATAMHLARHGARVVVGARRTDRLEKLVSAIRAGGGTAEYQAVDVTKREQVEALVRLAKAK
FGRVDVVVNNAGIMPLSPLEALKVDEWDRMIDVNIKGLLYGIAAGMPVFKEQKAGHFVNVSSIGGHFVVPTAAVYCATKF
AVRAISDGLRQESRDVRVTIISPGVVESELADTITDEGAKKAMDEFRANAIPPEAIARAILFAIEQPADVSVSEIIVRPT
GGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 3e-53 52
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-46 49