Gene Information

Name : Sinac_3398 (Sinac_3398)
Accession : YP_007203354.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4242703 - 4243434 bp
Length : 732 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGTCTTCTCCCGTTTCTGAACCCGTGGACGCGTTTTTGGCCGTGGATCTGGTCGTGCAGGCCGAGGGTGTCACGAAAAC
CTATGTCGAGGGAGACTCGACGGTGGCCGCCTTGCGTGGGATCGACCTTGTGATCGGCCGTGGTGAGCGGGTGGCCTTGC
TGGGCAAGTCGGGTTCGGGGAAGTCGACGCTTCTGAACCTGCTGGGTGGGCTGGACCGGCCCACGTCGGGGACCGTCCGG
ATTGCCGGATCGAACCTGCATGCGATGAACGCGGACGAGATGGCCCGGTTCCGGCTCGAGACGGTCGGGATGATTTTTCA
GGCCTACAACCTGGTCGATTCACGCACAACGTTGGAGAACGTCGAGTTGCCCATGGTCTTCGCCGGCCGGGCCAAGCACG
AGCGCAGAGCGGCAGCCCGTGCTGCGCTCGAGGCGGTCGGGTTGGGCGATCGGTTGAATCACCGGCCCAACCAACTCTCG
GGGGGCGAGCGGCAGCGGGTTGCGATCGCCCGGGCCTTGGTTAATCGCCCCGCCGTGCTGTTGGCCGACGAGCCGACCGG
CAACCTCGACACGGCAACCGCCCACGAGATTCTTCGCCTGCTCCTCGACCACCTGGAGCAGCACAACACGACCCTGATTC
TCGTGACACATGACGAGGAGCTTGCCCGTCGAAGCACTGATCGTGTTGTCCGGCTTCGCGACGGTCGAATCTTGGCGGGG
GTCGAGGAATGA

Protein sequence :
MSSPVSEPVDAFLAVDLVVQAEGVTKTYVEGDSTVAALRGIDLVIGRGERVALLGKSGSGKSTLLNLLGGLDRPTSGTVR
IAGSNLHAMNADEMARFRLETVGMIFQAYNLVDSRTTLENVELPMVFAGRAKHERRAAARAALEAVGLGDRLNHRPNQLS
GGERQRVAIARALVNRPAVLLADEPTGNLDTATAHEILRLLLDHLEQHNTTLILVTHDEELARRSTDRVVRLRDGRILAG
VEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_3398 YP_007203354.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-33 50
Sinac_3398 YP_007203354.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 9e-37 45
Sinac_3398 YP_007203354.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 7e-36 43
Sinac_3398 YP_007203354.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 5e-37 41