Gene Information

Name : Sinac_2107 (Sinac_2107)
Accession : YP_007202137.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : dihydrodipicolinate synthase/N-acetylneuraminate lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2598652 - 2599566 bp
Length : 915 bp
Strand : +
Note : PFAM: Dihydrodipicolinate synthetase family

DNA sequence : 
ATGTCGATCAAGCTGAGTGGTCTCATTGCCGCGACCCACACCCCGTTTCAGGCTGACGGTCAACTCAACCTCGCCGTCGT
GGCGCGTCAGGCCGAGCATTTGCTTGCGAACGGTGTCAGAACCGTTTTCATCGGTGGAACGACCGGCGAGAGCCATTCTC
TCGCCGTTGAGGAACGGCTGGCGCTGGCCCAACGTTGGAGCAAGGTCGCCCAAGGCTCCGAGCTTCGGGTCGTCGTCCAC
GTCGGCTCCAACTCGCTCACGGATGCACGGACGCTGGCCGCGCAGGCTCAATCTTTGGGTGTAGCCGCCATCGCGGCCTT
CTCCCCGAGCTATTTCAAACCGAAGGACGTGGCAACGCTCGTCGCTTGTTGCGCCGAGATCGCCGGCGCTGCCCCGGCCT
TGCCGTTCTACTTCTACGACATTCCCAGCATGACCGGCGTGCAACTCAGCATGCCCGCCTTTCTGGAACTGGCTACGAAG
AGCGTGCCGACGCTTGCGGGAATCAAGTTTACGAATCCCGACCTGATGGCTTACCAGCAATGCCTGCATGCTCAAAGCCA
TCGATTCGACATCCCTTGGGGCTCGGATGAAACGCTTCTCGGGGCGCTTGCCCTGGGCGCTTCGGGCGCTGTCGGCAGTA
CGTACAACTTTGCCGCTCCGATCTACCATCGCGTGCTGGCCGCCTTCGCGCAGGGCGATCTTGCCAAGGCTCGAGCCGAG
CAATATCGCTCGGTCGAACTCGTCGAGCTGCTGGCCGGTTTCGGCTTCATGGGGGCGGCCAAAACCGTGATGTCCTTCCT
GGGTGTCGACGTCGGCCCCGCCCGGCTCCCGCACTCGAATCTCACCGCCGAGCAAGTGGTGGAGTTGAAATCGAGCCTCG
AACGGCTTGGTTACTTCGACTGGATCCGGGCATGA

Protein sequence : 
MSIKLSGLIAATHTPFQADGQLNLAVVARQAEHLLANGVRTVFIGGTTGESHSLAVEERLALAQRWSKVAQGSELRVVVH
VGSNSLTDARTLAAQAQSLGVAAIAAFSPSYFKPKDVATLVACCAEIAGAAPALPFYFYDIPSMTGVQLSMPAFLELATK
SVPTLAGIKFTNPDLMAYQQCLHAQSHRFDIPWGSDETLLGALALGASGAVGSTYNFAAPIYHRVLAAFAQGDLAKARAE
QYRSVELVELLAGFGFMGAAKTVMSFLGVDVGPARLPHSNLTAEQVVELKSSLERLGYFDWIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1776 NP_231411.1 N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-47 41
VC0395_A1374 YP_001217317.1 dihydrodipicolinate synthetase family protein Not tested VPI-2 Protein 2e-47 41
VPI2_0024c ACA01841.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase Not tested VPI-2 Protein 2e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_2107 YP_007202137.1 dihydrodipicolinate synthase/N-acetylneuraminate lyase VFG1109 Protein 7e-48 41