Gene Information

Name : Sinac_1806 (Sinac_1806)
Accession : YP_007201867.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2246262 - 2246792 bp
Length : 531 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence :
ATGGCAGAGACGCGGAAGGGCGAAGTGACATTCAAGGGCAACCCGGTCGAGCTGGTCGGCCCCAAACTCAACGTAGGGGA
CAAAGCGCCCGACTTTGCCAGCGTCGGAGCCGGTCTTGCGGTGGTGACCCTGGCCGACACCGCCGGCAAGGCGCGGCTTT
TCAACGTGATCCCGTCGCTCGACACCCCGGTTTGCAATATCCAGACCAGGAAGTTCTCCGAAGAGCTGCAATCGCTTGGC
GACAAGGTCGCGGTCTATACGGTGAGCCTCGACCTCCCGTTCGCGCAGCAGCGCTGGTGCACCGAGGCGAAGGTCGAGAA
CCTCAAGAACCTGTCCGATGCGCACAACCATAGCTTCGGCGAACACTACGGTGTGCTGATTCAAGGGTTGCCGATCCCCT
TGCTGGCCCGTGCGGTTATCGTGGTGGATCCGGACAACACGATTCGCTATATCGAAATCGTCCCGGAAATCGCGCAAGAG
CCGAATTACGAGCCCGCCCTGAAGGCCTTGAAAGAGGCGGCCGGCGTCTGA

Protein sequence :
MAETRKGEVTFKGNPVELVGPKLNVGDKAPDFASVGAGLAVVTLADTAGKARLFNVIPSLDTPVCNIQTRKFSEELQSLG
DKVAVYTVSLDLPFAQQRWCTEAKVENLKNLSDAHNHSFGEHYGVLIQGLPIPLLARAVIVVDPDNTIRYIEIVPEIAQE
PNYEPALKALKEAAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-20 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-20 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-20 42
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_1806 YP_007201867.1 peroxiredoxin VFG0087 Protein 1e-20 42