Gene Information

Name : Sinac_1756 (Sinac_1756)
Accession : YP_007201822.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2192726 - 2193445 bp
Length : 720 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGACGATTCTACTTGTTCCATTGAGTTGAAGGATGTTACGAAAGAGTATCGCCGCGATGAGTTCCGGATCCCGGTCCT
CGTCAATCTCGACCTGCGGGTTGCGGAAGGCGAATACCTCGCCCTGATGGGTCCCTCGGGATCGGGTAAGACGACCCTGC
TCAATCTGATCGCGGGACTCGACCGCGCCTCCCAGGGCTCGGTCCTCGTCCATGGTCAGGAGCTTGGATCGATGTCCGAC
TCGCGGATCACGCGTTGGCGGGCCGACAACGTCGGGTTTATCTTCCAGCTCTACAACCTGATTCCGGTTCTGACGGCCTT
CGAGAACGTCGAACTGCCCCTCTTGCTGACGAAGCTCTCCAAGCGGCGACGGCGCGAGAACGTCATGACGGCGCTTCGAG
TCGTGGGGCTCGAGGGGCGTGAAGATCACTACCCGCGCCAGCTCTCCGGTGGTCAGGAGCAACGCGTCGCCATCGCCCGA
GCGATCGTGACCGATCCCTACTTGCTCGTCGCCGACGAGCCGACTGGCGACCTCGATCGCACGAGCGCTGAGGAGATCCT
GGACCTGCTCGAGCAACTCAACCGTGAGTTCCAGAAAACGATCGTGATGGTTACTCACGACCCCCTCGCCGCGCAACGAG
CGAGTCGTGTCCTCCACCTCGACAAGGGAAGGCTTGTCGATGACATCGCGCAGCCCTCGAAGATCGGGGCCGTGTCATGA

Protein sequence : 
MDDSTCSIELKDVTKEYRRDEFRIPVLVNLDLRVAEGEYLALMGPSGSGKTTLLNLIAGLDRASQGSVLVHGQELGSMSD
SRITRWRADNVGFIFQLYNLIPVLTAFENVELPLLLTKLSKRRRRENVMTALRVVGLEGREDHYPRQLSGGQEQRVAIAR
AIVTDPYLLVADEPTGDLDRTSAEEILDLLEQLNREFQKTIVMVTHDPLAAQRASRVLHLDKGRLVDDIAQPSKIGAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sinac_1756 YP_007201822.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-36 45
Sinac_1756 YP_007201822.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-33 44
Sinac_1756 YP_007201822.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 9e-37 43