Gene Information

Name : Sinac_1316 (Sinac_1316)
Accession : YP_007201398.1
Strain : Singulisphaera acidiphila DSM 18658
Genome accession: NC_019892
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1651670 - 1652566 bp
Length : 897 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC

DNA sequence :
ATGCATCCGAGTGTCGTCCAGTTCCTGGAGCATCTCAAGACGGAACGAAACTCCTCAGAGCACACGCTCCGGTGCTACGA
GGACGACCTCGTCCTTTTCTGCCAGTTCCTCAATGAGGGCCACGAGGGAGAGGCGAACCCGATCGACGTTGATGGCCGGC
GTCTGCGAAGATATTCGGCCTGGCTCAACGGCCGCGACTATGCGGCCAGCACGATTGCCCGCCGATTGGCCAGCTTACGC
TCCTTTTACCGGTTCCAGCGACGGCGCGGGACGATCACGTCCAACCCCACCGAAGCGCTCCGCAACCCAAAACAGCCGAA
GCGGCTTCCTCGTCTCCTCCGCGTCGAGGAGATCATCCAGTTGCTCGACTCCATCGCCACCGCCACGCCGCTCGGCATCC
GTGACCGGAGCATGTTCGAGACGCTCTACGGCGGCGGCCTGCGCGTCGGCGAACTCGTCGGCCTGAACCTCGACGACCTC
GACCTCGAGCAAGAACTCCTCCGCGTCCGCGGCAAGGGGAAACGTGAGCGGCTCTGCCCGATCGGTCGGACGTCCGCGAC
CTGGATCGCGAACTGGCTGCAAGTTCGCCAGCCGAAGTCCGTGGACGAACGGGCCGTCTATCTCAATCGATACGGCGAAC
GACTGACGACGCGGAGCGTCGGACGGTTGCTGGAGACCCACCTCGTCGGCCACGGCCTCGACCCGTCGGCCAGCCCGCAC
ACCCTCCGCCACAGTTTTGCGACCCACTTACTCGATCGAGGGGCCGACCTGCGGAGCGTCCAGGAACTTCTCGGCCATCG
CAATTTAACGACGACCCAGATCTACACACACGTGACCGAAGAGCGAATGCTCGACGTGTACAAAAGCTCGCATCCTCGCG
CCCAGGGAAAAACTTAA

Protein sequence :
MHPSVVQFLEHLKTERNSSEHTLRCYEDDLVLFCQFLNEGHEGEANPIDVDGRRLRRYSAWLNGRDYAASTIARRLASLR
SFYRFQRRRGTITSNPTEALRNPKQPKRLPRLLRVEEIIQLLDSIATATPLGIRDRSMFETLYGGGLRVGELVGLNLDDL
DLEQELLRVRGKGKRERLCPIGRTSATWIANWLQVRQPKSVDERAVYLNRYGERLTTRSVGRLLETHLVGHGLDPSASPH
TLRHSFATHLLDRGADLRSVQELLGHRNLTTTQIYTHVTEERMLDVYKSSHPRAQGKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-30 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-30 41