Gene Information

Name : C770_GR4pD0483 (C770_GR4pD0483)
Accession : YP_007194200.1
Strain :
Genome accession: NC_019849
Putative virulence/resistance : Virulence
Product : TRAP transporter, DctM subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 520334 - 521647 bp
Length : 1314 bp
Strand : +
Note : -

DNA sequence :
ATGACCCTGTTCCATCTGGCCGGCCCCTCGCTTCTCGTCGTCGTCCTGTTTCTGCTGTCGACGCCGATCACCTGGGCCAT
GGCGATCGGAGCGTTCGCCTTCTTCCTCATCAATATGGACATGATCCCGCTCGCCAATTTCGCGCAGGAAATGGCTGAGG
GCAGTCAATCCGTGTCCTTGTTGGCGCTGCCGCTGTTCGTTCTTGCCGGCTGCATAATGAACGCCTCGGGCATCACGCGG
CGTCTGTTGGCGCTTGCGGACGTGCTCGTCGGCCACATGACGGGCGCGCTGGCGCAGATGTGCACCGTGCTCGGCACCTT
GCTCGGCGGACTTACCGCATCTGCCAATGCCGATGCGGCGATGCTCGCCAAGACGCTCGGCGTCGAGATGTCGCAACGGG
GCTACAGCCGGGCCTTCGCCGCGGTCATCACATCGTCGGCGGCCATTATCACGAGCCTCATTCCGCCGTCGATCGGCCTT
ATCGTCTATGGTTTTCTGGCGGAGACGTCCATCGGCCGGCTCTTCGCAGCGGGTGTCATACCTGGCCTTGTGCTGGCGAC
CGGGCTCATGGTCACCACCTATTTCATCGCCCGCAAGCGTGGTTACAAGCCGTTGCGCAAAGAGCGTGCCACCCGCGCAG
AGGGCGTCCGGGCGCTGATCGACGGGCTCTGGGCGCTGTCGATCCCGGTGGTGATCTTCGCCGGTACGCGATACGGTCTT
TTCACCACCACCGAAGCCGGTGCGGTGGTGGTCGTCTACGTGCTCTTCGTCGCCGTGTTCGGCTACCGCGAATTCACCTT
CCGCCAGATCCCGGAGGTTCTTGCCGAGGCCGTGCGCGATTCGGCCGTGGTCATGATCATGATCTGCGCGGCGGCAGCCT
TCGGTTTCTATCTCGCCTGGGAGCAGGTGCCGCAGGCCATGTCCGGCTGGCTCGGCGAAGCCACCGACAATCCGCTCCTG
ATGCTGCTCCTCATCAACGTCCTGCTGATCGTCATCGGCACGGCGATCGAGGGGTCGGCGGCGCTGATCATCCTGACGCC
CATGCTGATCCCGATCATCGACGGCGTGGGCATCGATCGCGTGCATTTCGGCGTCGTCTTCATCACGAACCTGACCATCG
CCGGCATCACGCCGCCGGTCGGGGGATTGATGTACATCTCGTCCATGGTGCTGAAAGTGCCGATGATGGCCTATGCCCGC
GAGGTGCTGCCTTACCTGGCGATGATGATGGTCATTCTCGTCATGCTGAGCATGTTCCCGCAGCTGTCGCTTTGGCTGCC
GAACCTGGTCTATGGGACGACGGCGGTCCAATAG

Protein sequence :
MTLFHLAGPSLLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAGCIMNASGITR
RLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEMSQRGYSRAFAAVITSSAAIITSLIPPSIGL
IVYGFLAETSIGRLFAAGVIPGLVLATGLMVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGL
FTTTEAGAVVVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGWLGEATDNPLL
MLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMMAYAR
EVLPYLAMMMVILVMLSMFPQLSLWLPNLVYGTTAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-40 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-40 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 2e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4pD0483 YP_007194200.1 TRAP transporter, DctM subunit VFG1110 Protein 1e-40 42