Gene Information

Name : C770_GR4pD1301 (C770_GR4pD1301)
Accession : YP_007195003.1
Strain :
Genome accession: NC_019849
Putative virulence/resistance : Virulence
Product : tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1442448 - 1443419 bp
Length : 972 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACGGGAATGATTTCGCTCGCGCTTGCGGGGCTGCTGATGGCGTCGCAAGCCATGGCTCAAGAGGCGCGCACATT
GCGCCTGGGAATGCAGGGTACGGCCGGAGACCCGCAATTCGAGGGCGTCACCGAGGCGGCGCGCATCATCAAGGAAAAAT
CGGGCGGCCGGCTGACGCTGGAAATCTTCCCGAATTCTCAGCTCGGTACATTCACCGAGATGATGGAGCAAGTGACGCTC
GGCGAGCTCGACTTCACGCTGAACCCGTTCGGCGGTATGGACGCCTGGGTTCCGCGGGCCGTGTTGGCGAGCACCGCCTA
TGTCGTCGGCGACTTCGATCACCTTCAGAAGATCATCGCCTCCGACTGGGGTAAGGGGATCGTCGACGAGATGCGGACCG
AGCACAAGTGGCGCATGGTCGACTCCTGGTACTTCGGGACGCGGCACACGACGGCAAAGAAACCGATCGAAAAGCCTGCC
GATTTCGCGGGCATGAAGCTGCGCGTCCCGAACTCGGCGCCGCTTCTTACCTGGGCGAAGGCGATGGGCGCGAGCCCCAC
GCCGGTCGCATTCGCCGAAGTCTATCTGGCACTCCAGACCAATCAGGTGGACGGCCAGGAAAACCCGCTGCCCATCATCG
ACTCGATGAAGTTCACCGAGGTCCAGTCCCATGTCTCCCTGACTGGGCATCTGGTGCAGGACCAGGTCATCCTTATGTCG
GAAGACACGTGGAATGCGCTCGAGCCCGCCGACCAGAAGGTCGTGATGGAGGCATTCGAGGCGGGCGGCGCCCTCAACGA
CAAGTTGGTCACCGACAAGGAAGCGAGCCTCGTCAGCGATTTTCGCGAGCGCGGCATCACCGTGGTCGAGCCCGACAAGG
CGGCGTTCCAGGAAGCGATGAAGCCCGTCTATGCCGATCTCGACGCAAAATTCGGTGCCGACACGGTGAAGACGCTGCTC
GATCTCCGTTAA

Protein sequence : 
MKTGMISLALAGLLMASQAMAQEARTLRLGMQGTAGDPQFEGVTEAARIIKEKSGGRLTLEIFPNSQLGTFTEMMEQVTL
GELDFTLNPFGGMDAWVPRAVLASTAYVVGDFDHLQKIIASDWGKGIVDEMRTEHKWRMVDSWYFGTRHTTAKKPIEKPA
DFAGMKLRVPNSAPLLTWAKAMGASPTPVAFAEVYLALQTNQVDGQENPLPIIDSMKFTEVQSHVSLTGHLVQDQVILMS
EDTWNALEPADQKVVMEAFEAGGALNDKLVTDKEASLVSDFRERGITVVEPDKAAFQEAMKPVYADLDAKFGADTVKTLL
DLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1779 NP_231414.1 C4-dicarboxylate-binding protein Not tested VPI-2 Protein 9e-67 45
dctP-1 YP_001217320.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 9e-67 45
VPI2_0027c ACA01844.1 C4-dicarboxylate-binding periplasmic protein Not tested VPI-2 Protein 7e-67 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C770_GR4pD1301 YP_007195003.1 tripartite ATP-independent periplasmic transporter solute receptor, DctP family VFG1112 Protein 4e-67 45